RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SUCLA2Q9P2R7 463 aaPredicted RBP14.51□□□□□ -0.09
XRN1-203ENST00000463916 PCDHB6Q9Y5E3 794 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 DKC1O60832 514 aaKnown RBP eCLIP14.51□□□□□ -0.09
XRN1-203ENST00000463916 SPATA31C1P0DKV0 1188 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 DARSP14868 501 aaKnown RBP14.51□□□□□ -0.09
XRN1-203ENST00000463916 POU3F3P20264 500 aaPredicted RBP14.51□□□□□ -0.09
XRN1-203ENST00000463916 GATMP50440 423 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 DSC3Q14574 896 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 RHPN2Q8IUC4 686 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.51□□□□□ -0.09
XRN1-203ENST00000463916 MICALL1Q8N3F8 863 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 NLRP7Q8WX94 980 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 TMEM143Q96AN5 459 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 MUC3AQ02505 3323 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 COL4A4P53420 1690 aaPredicted RBP14.5□□□□□ -0.09
XRN1-203ENST00000463916 A0A087WZ62 844 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 C9IYK1 514 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 OR52Z1P0C646 297 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 TRAPPC10P48553 1259 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 EPC2Q52LR7 807 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 PIGOQ8TEQ8 1089 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 FDXACB1Q9BRP7 624 aaPredicted RBP14.5□□□□□ -0.09
XRN1-203ENST00000463916 DENND3A2RUS2 1198 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 MED24O75448 989 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 LYPLA2O95372 231 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 SARSP49591 514 aaKnown RBP14.5□□□□□ -0.09
XRN1-203ENST00000463916 DNM2P50570 870 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 MCTP1Q6DN14 999 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 OTUD6AQ7L8S5 288 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 CATSPER3Q86XQ3 398 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 NPAS4Q8IUM7 802 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 PRPF31Q8WWY3 499 aaKnown RBP14.5□□□□□ -0.09
XRN1-203ENST00000463916 SLC7A3Q8WY07 619 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 SCLT1Q96NL6 688 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 SMC3Q9UQE7 1217 aa14.5□□□□□ -0.09
XRN1-203ENST00000463916 ADGRA3Q8IWK6 1321 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 POLGP54098 1239 aaPredicted RBP14.49□□□□□ -0.09
XRN1-203ENST00000463916 FAM189BP81408 668 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 ORC2Q13416 577 aaPredicted RBP14.49□□□□□ -0.09
XRN1-203ENST00000463916 CUL4AQ13619 759 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 SLC24A5Q71RS6 500 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 TMEM192Q8IY95 271 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 FIBCD1Q8N539 461 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 NLRP4Q96MN2 994 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 IFT122Q9HBG6 1241 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 XPNPEP1Q9NQW7 623 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 NOL7Q9UMY1 257 aaKnown RBP14.49□□□□□ -0.09
XRN1-203ENST00000463916 KIF3AQ9Y496 699 aa14.49□□□□□ -0.09
XRN1-203ENST00000463916 ARID2Q68CP9 1835 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 PTGDRQ13258 359 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 BTG3Q14201 252 aaPredicted RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 IL17AQ16552 155 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 PAN2Q504Q3 1202 aaKnown RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 FAM102BQ5T8I3 360 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 FBXO22Q8NEZ5 403 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 RFC5P40937 340 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 EMC2Q15006 297 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 ODR4Q5SWX8 454 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 NEK9Q8TD19 979 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 CLP1Q92989 425 aaKnown RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 JPH2Q9BR39 696 aaPredicted RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 ANKEF1Q9NU02 776 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 PPME1Q9Y570 386 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 PCDHB7Q9Y5E2 793 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 COL4A3BPQ9Y5P4 624 aa14.48□□□□□ -0.09
XRN1-203ENST00000463916 MRPL42Q9Y6G3 142 aaKnown RBP14.48□□□□□ -0.09
XRN1-203ENST00000463916 H3BQV1 296 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 GTPBP6O43824 516 aaPredicted RBP14.47□□□□□ -0.09
XRN1-203ENST00000463916 STAG3L1P0CL83 205 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 SRGAP2CP0DJJ0 459 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 RARRES1P49788 294 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 CDC42EP1Q00587 391 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 LAMTOR4Q0VGL1 99 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 ECM1Q16610 540 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 LARP1BQ659C4 914 aaKnown RBP14.47□□□□□ -0.09
XRN1-203ENST00000463916 ZNF410Q86VK4 478 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 MINDY3Q9H8M7 445 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 C1orf112Q9NSG2 853 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 LRFN2Q9ULH4 789 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 NLRC5Q86WI3 1866 aa14.47□□□□□ -0.09
XRN1-203ENST00000463916 H3BNC9 293 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 FGFR1P11362 822 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 BMPR1AP36894 532 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
XRN1-203ENST00000463916 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 PSPC1Q8WXF1 523 aaKnown RBP14.46□□□□□ -0.09
XRN1-203ENST00000463916 POLR3CQ9BUI4 534 aaPredicted RBP14.46□□□□□ -0.09
XRN1-203ENST00000463916 TUFT1Q9NNX1 390 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.46□□□□□ -0.09
XRN1-203ENST00000463916 HCSTQ9UBK5 93 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 RPA1P27694 616 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 FERMT3Q86UX7 667 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 EXOC8Q8IYI6 725 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 CMTR2Q8IYT2 770 aaKnown RBP14.46□□□□□ -0.09
XRN1-203ENST00000463916 SAMD11Q96NU1 681 aa14.46□□□□□ -0.09
XRN1-203ENST00000463916 MTRQ99707 1265 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms