RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CCNT1O60563 726 aaKnown RBP21.19■□□□□ 0.98
SF3A1-205ENST00000463818 FGFR1P11362 822 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 FDPSP14324 419 aaKnown RBP21.19■□□□□ 0.98
SF3A1-205ENST00000463818 DARSP14868 501 aaKnown RBP21.19■□□□□ 0.98
SF3A1-205ENST00000463818 GTF2F1P35269 517 aaKnown RBP eCLIP21.19■□□□□ 0.98
SF3A1-205ENST00000463818 LTBRP36941 435 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 PSMC5P62195 406 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 ME3Q16798 604 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 CTC1Q2NKJ3 1217 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 POF1BQ8WVV4 589 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 NLRP7Q8WX94 980 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 SCLT1Q96NL6 688 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 KCNMB3Q9NPA1 279 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 AAASQ9NRG9 546 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 TYW1Q9NV66 732 aaKnown RBP21.19■□□□□ 0.98
SF3A1-205ENST00000463818 PCDHB12Q9Y5F1 795 aa21.19■□□□□ 0.98
SF3A1-205ENST00000463818 IGKV6-21A0A0C4DH24 114 aa21.18■□□□□ 0.98
SF3A1-205ENST00000463818 GCFC2P16383 781 aaKnown RBP21.18■□□□□ 0.98
SF3A1-205ENST00000463818 FGFR4P22455 802 aa21.18■□□□□ 0.98
SF3A1-205ENST00000463818 IRS1P35568 1242 aa21.18■□□□□ 0.98
SF3A1-205ENST00000463818 PPP2R5CQ13362 524 aa21.18■□□□□ 0.98
SF3A1-205ENST00000463818 EARS2Q5JPH6 523 aaKnown RBP21.18■□□□□ 0.98
SF3A1-205ENST00000463818 C1QTNF1Q9BXJ1 281 aa21.18■□□□□ 0.98
SF3A1-205ENST00000463818 VAV3Q9UKW4 847 aa21.18■□□□□ 0.98
SF3A1-205ENST00000463818 MYH9P35579 1960 aaKnown RBP21.17■□□□□ 0.98
SF3A1-205ENST00000463818 MARCH6O60337 910 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
SF3A1-205ENST00000463818 LARGE1O95461 756 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 COL9A1P20849 921 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 DNM2P50570 870 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 CDC42EP1Q00587 391 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 DLX2Q07687 328 aaPredicted RBP21.17■□□□□ 0.98
SF3A1-205ENST00000463818 ANO5Q75V66 913 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 GJD3Q8N144 294 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 HAS1Q92839 578 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 KHSRPQ92945 711 aaKnown RBP eCLIP21.17■□□□□ 0.98
SF3A1-205ENST00000463818 NAP1L4Q99733 375 aaKnown RBP21.17■□□□□ 0.98
SF3A1-205ENST00000463818 GCOM2Q9BZD3 368 aaPredicted RBP21.17■□□□□ 0.98
SF3A1-205ENST00000463818 TMEM117Q9H0C3 514 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 HCSTQ9UBK5 93 aa21.17■□□□□ 0.98
SF3A1-205ENST00000463818 MAFO75444 373 aaPredicted RBP21.16■□□□□ 0.98
SF3A1-205ENST00000463818 QARSP47897 775 aaKnown RBP21.16■□□□□ 0.98
SF3A1-205ENST00000463818 NEK4P51957 841 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 NR5A1Q13285 461 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 ADAM15Q13444 863 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 ECHDC2Q86YB7 292 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 GTF3C6Q969F1 213 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 PPP2R3CQ969Q6 453 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 CASD1Q96PB1 797 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 CWH43Q9H720 699 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 RNF19AQ9NV58 838 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 SUCLA2Q9P2R7 463 aaPredicted RBP21.16■□□□□ 0.98
SF3A1-205ENST00000463818 LOXHD1Q8IVV2 1947 aa21.16■□□□□ 0.98
SF3A1-205ENST00000463818 A0A087WZ62 844 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 FAM205CA6NFA0 338 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 TBX3O15119 743 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 LINC01565O15544 149 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 HOXA2O43364 376 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 DKC1O60832 514 aaKnown RBP eCLIP21.15■□□□□ 0.98
SF3A1-205ENST00000463818 EIF5BO60841 1220 aaKnown RBP21.15■□□□□ 0.98
SF3A1-205ENST00000463818 SEC24BO95487 1268 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 P4HBP07237 508 aaKnown RBP21.15■□□□□ 0.98
SF3A1-205ENST00000463818 KRT2P35908 639 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 PLA2G4FQ68DD2 849 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 ADGRD2Q7Z7M1 963 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 COLGALT1Q8NBJ5 622 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 RNF169Q8NCN4 708 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 MICAL1Q8TDZ2 1067 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 FDXACB1Q9BRP7 624 aaPredicted RBP21.15■□□□□ 0.98
SF3A1-205ENST00000463818 FAM50BQ9Y247 325 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 RALGAPA2Q2PPJ7 1873 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 NLRC5Q86WI3 1866 aa21.15■□□□□ 0.98
SF3A1-205ENST00000463818 A0A0U1RQF3 1178 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 FGF18O76093 207 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 SSTR3P32745 418 aaPredicted RBP21.14■□□□□ 0.97
SF3A1-205ENST00000463818 NPEPPSP55786 919 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 UBE3AQ05086 875 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 EPHA7Q15375 998 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 CLUL1Q15846 466 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 LRRC55Q6ZSA7 311 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 RBM23Q86U06 439 aaKnown RBP21.14■□□□□ 0.97
SF3A1-205ENST00000463818 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 RHPN2Q8IUC4 686 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 THNSL1Q8IYQ7 743 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 NSUN7Q8NE18 718 aaKnown RBP21.14■□□□□ 0.97
SF3A1-205ENST00000463818 JPH2Q9BR39 696 aaPredicted RBP21.14■□□□□ 0.97
SF3A1-205ENST00000463818 BRMS1Q9HCU9 246 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 CYP26B1Q9NR63 512 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 PCDHGC5Q9Y5F6 944 aa21.14■□□□□ 0.97
SF3A1-205ENST00000463818 BAG4O95429 457 aaKnown RBP21.13■□□□□ 0.97
SF3A1-205ENST00000463818 LAG3P18627 525 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 NRIP1P48552 1158 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 CSPP1Q1MSJ5 1256 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 KSR1Q8IVT5 923 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 ABI1Q8IZP0 508 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 ZNF579Q8NAF0 562 aaKnown RBP21.13■□□□□ 0.97
SF3A1-205ENST00000463818 TNFRSF25Q93038 417 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 CEP170P1Q96L14 293 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 DACT1Q9NYF0 836 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms