RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 C1orf112Q9NSG2 853 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 MTCH2Q9Y6C9 303 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 CDH23Q9H251 3354 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 POTEMA6NI47 508 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 H3BQV1 296 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 ZBTB39O15060 712 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 OR52Z1P0C646 297 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 DARSP14868 501 aaKnown RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 ZSCAN20P17040 1043 aaPredicted RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 RFC5P40937 340 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 TECP42680 631 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 SARSP49591 514 aaKnown RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 BTG3Q14201 252 aaPredicted RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 SLC24A5Q71RS6 500 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 ZNF689Q96CS4 500 aaPredicted RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 GCOM2Q9BZD3 368 aaPredicted RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 DHX33Q9H6R0 707 aaKnown RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 RNF216Q9NWF9 866 aaPredicted RBP21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 PCDHB7Q9Y5E2 793 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 LOXHD1Q8IVV2 1947 aa21.11■□□□□ 0.97
SLC6A1-204ENST00000462473 ADGRA3Q8IWK6 1321 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 A0A087WZ62 844 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 LPXNO60711 386 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 LYPLA2O95372 231 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 EPC2Q52LR7 807 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 ZNF410Q86VK4 478 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 TMEM192Q8IY95 271 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 CRIPAKQ8N1N5 446 aa21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 CCDC43Q96MW1 224 aaKnown RBP21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 FDXACB1Q9BRP7 624 aaPredicted RBP21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 RC3H2Q9HBD1 1191 aaKnown RBP21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 BMP2KQ9NSY1 1161 aaPredicted RBP21.1■□□□□ 0.97
SLC6A1-204ENST00000462473 TTC3P53804 2025 aa21.09■□□□□ 0.97
SLC6A1-204ENST00000462473 NBR1Q14596 966 aa21.09■□□□□ 0.97
SLC6A1-204ENST00000462473 ERMNQ8TAM6 284 aa21.09■□□□□ 0.97
SLC6A1-204ENST00000462473 TMEM143Q96AN5 459 aa21.09■□□□□ 0.97
SLC6A1-204ENST00000462473 NLRP4Q96MN2 994 aa21.09■□□□□ 0.97
SLC6A1-204ENST00000462473 INO80BQ9C086 356 aaPredicted RBP21.09■□□□□ 0.97
SLC6A1-204ENST00000462473 C9IYK1 514 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 GAS2O43903 313 aaKnown RBP21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 CSDE1O75534 798 aaKnown RBP21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 FGFR4P22455 802 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 DSC3Q14574 896 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 EMC2Q15006 297 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 KSR1Q8IVT5 923 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 TCP11Q8WWU5 503 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 MTRQ99707 1265 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 ANKEF1Q9NU02 776 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 LMCD1Q9NZU5 365 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 RWDD3Q9Y3V2 267 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 COL4A3BPQ9Y5P4 624 aa21.08■□□□□ 0.97
SLC6A1-204ENST00000462473 SFPQP23246 707 aaKnown RBP eCLIP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 CTNNB1P35222 781 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 TOB1P50616 345 aaPredicted RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 GPM6BQ13491 265 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 SKIV2LQ15477 1246 aaKnown RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 PAN2Q504Q3 1202 aaKnown RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 LARP1BQ659C4 914 aaKnown RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 CATSPER3Q86XQ3 398 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 CMTR2Q8IYT2 770 aaKnown RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 PIGOQ8TEQ8 1089 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 PRPF31Q8WWY3 499 aaKnown RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 PSPC1Q8WXF1 523 aaKnown RBP21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 TUFT1Q9NNX1 390 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 PRDM6Q9NQX0 595 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 PCDHB6Q9Y5E3 794 aa21.07■□□□□ 0.96
SLC6A1-204ENST00000462473 COL4A6Q14031 1691 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 A0A087WWV3 80 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 H3BNC9 293 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 DGAT1O75907 488 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 SPATA31C1P0DKV0 1188 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 BMPR1AP36894 532 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 GATMP50440 423 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 FAM189BP81408 668 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 PTGDRQ13258 359 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 C4orf32Q8N8J7 132 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 POLR3CQ9BUI4 534 aaPredicted RBP21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 ELAC1Q9H777 363 aaKnown RBP21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 ATP6V0A4Q9HBG4 840 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 TMEM161AQ9NX61 479 aa21.06■□□□□ 0.96
SLC6A1-204ENST00000462473 ASAP2O43150 1006 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 MED24O75448 989 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 RB1P06400 928 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 SRGAP2CP0DJJ0 459 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 LAMTOR4Q0VGL1 99 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 PTPROQ16827 1216 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 RILPL1Q5EBL4 403 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 CLP1Q92989 425 aaKnown RBP21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 CHST12Q9NRB3 414 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 DACT1Q9NYF0 836 aa21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 MRPL42Q9Y6G3 142 aaKnown RBP21.05■□□□□ 0.96
SLC6A1-204ENST00000462473 TBKBP1A7MCY6 615 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 RARRES1P49788 294 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 FXR2P51116 673 aaKnown RBP eCLIP21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 FAM102BQ5T8I3 360 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 HAUS3Q68CZ6 603 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 CATSPER4Q7RTX7 472 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 FERMT3Q86UX7 667 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 NACC1Q96RE7 527 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms