RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 LETM2Q2VYF4 491 aa17.4■□□□□ 0.38
APP-211ENST00000462267 PHLDB3Q6NSJ2 640 aa17.4■□□□□ 0.38
APP-211ENST00000462267 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
APP-211ENST00000462267 GPR161Q8N6U8 529 aaKnown RBP17.4■□□□□ 0.38
APP-211ENST00000462267 AUTS2Q8WXX7 1259 aa17.4■□□□□ 0.38
APP-211ENST00000462267 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
APP-211ENST00000462267 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
APP-211ENST00000462267 NT5C1B-RDH14C9J2C7 533 aa17.39■□□□□ 0.37
APP-211ENST00000462267 HIP1O00291 1037 aa17.39■□□□□ 0.37
APP-211ENST00000462267 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
APP-211ENST00000462267 KIAA0319Q5VV43 1072 aa17.39■□□□□ 0.37
APP-211ENST00000462267 FAM160B1Q5W0V3 765 aa17.39■□□□□ 0.37
APP-211ENST00000462267 C15orf39Q6ZRI6 1047 aa17.39■□□□□ 0.37
APP-211ENST00000462267 DDX53Q86TM3 631 aaKnown RBP17.39■□□□□ 0.37
APP-211ENST00000462267 RNF169Q8NCN4 708 aa17.39■□□□□ 0.37
APP-211ENST00000462267 FEZF2Q8TBJ5 459 aa17.39■□□□□ 0.37
APP-211ENST00000462267 RSPH1Q8WYR4 309 aa17.39■□□□□ 0.37
APP-211ENST00000462267 PPP1R16BQ96T49 567 aa17.39■□□□□ 0.37
APP-211ENST00000462267 MXRA8Q9BRK3 442 aa17.39■□□□□ 0.37
APP-211ENST00000462267 DLGAP2Q9P1A6 1054 aa17.39■□□□□ 0.37
APP-211ENST00000462267 SIT1Q9Y3P8 196 aa17.39■□□□□ 0.37
APP-211ENST00000462267 A0A0U1RQF3 1178 aa17.38■□□□□ 0.37
APP-211ENST00000462267 BACH1O14867 736 aa17.38■□□□□ 0.37
APP-211ENST00000462267 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
APP-211ENST00000462267 ATXN1P54253 815 aaKnown RBP17.38■□□□□ 0.37
APP-211ENST00000462267 ST3GAL2Q16842 350 aa17.38■□□□□ 0.37
APP-211ENST00000462267 SPECC1Q5M775 1068 aa17.38■□□□□ 0.37
APP-211ENST00000462267 NXPE3Q969Y0 559 aa17.38■□□□□ 0.37
APP-211ENST00000462267 MAP3K14Q99558 947 aa17.38■□□□□ 0.37
APP-211ENST00000462267 LZTS2Q9BRK4 669 aa17.38■□□□□ 0.37
APP-211ENST00000462267 CA14Q9ULX7 337 aa17.38■□□□□ 0.37
APP-211ENST00000462267 PCDHA6Q9UN73 950 aa17.38■□□□□ 0.37
APP-211ENST00000462267 PCDHA8Q9Y5H6 950 aa17.38■□□□□ 0.37
APP-211ENST00000462267 FANCMQ8IYD8 2048 aa17.38■□□□□ 0.37
APP-211ENST00000462267 CHD6Q8TD26 2715 aa17.37■□□□□ 0.37
APP-211ENST00000462267 MAP1BP46821 2468 aaKnown RBP17.37■□□□□ 0.37
APP-211ENST00000462267 ZBTB42B2RXF5 422 aa17.37■□□□□ 0.37
APP-211ENST00000462267 C22orf31O95567 290 aa17.37■□□□□ 0.37
APP-211ENST00000462267 VTNP04004 478 aa17.37■□□□□ 0.37
APP-211ENST00000462267 DCNP07585 359 aaKnown RBP17.37■□□□□ 0.37
APP-211ENST00000462267 SRFP11831 508 aa17.37■□□□□ 0.37
APP-211ENST00000462267 KIF5BP33176 963 aa17.37■□□□□ 0.37
APP-211ENST00000462267 UBE2SQ16763 222 aa17.37■□□□□ 0.37
APP-211ENST00000462267 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
APP-211ENST00000462267 ZNF710Q8N1W2 664 aa17.37■□□□□ 0.37
APP-211ENST00000462267 SLC44A3Q8N4M1 653 aa17.37■□□□□ 0.37
APP-211ENST00000462267 CTCFLQ8NI51 663 aaPredicted RBP17.37■□□□□ 0.37
APP-211ENST00000462267 HELQQ8TDG4 1101 aa17.37■□□□□ 0.37
APP-211ENST00000462267 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
APP-211ENST00000462267 ZFHX4Q86UP3 3567 aa17.37■□□□□ 0.37
APP-211ENST00000462267 PRR5-ARHGAP8B1AHC4 643 aa17.36■□□□□ 0.37
APP-211ENST00000462267 ARHGAP8P85298 464 aa17.36■□□□□ 0.37
APP-211ENST00000462267 ITGB3BPQ13352 177 aaPredicted RBP17.36■□□□□ 0.37
APP-211ENST00000462267 VARS2Q5ST30 1063 aaKnown RBP17.36■□□□□ 0.37
APP-211ENST00000462267 PDXDC2PQ6P474 469 aa17.36■□□□□ 0.37
APP-211ENST00000462267 ABHD15Q6UXT9 468 aa17.36■□□□□ 0.37
APP-211ENST00000462267 TMEM173Q86WV6 379 aaPredicted RBP17.36■□□□□ 0.37
APP-211ENST00000462267 METTL13Q8N6R0 699 aa17.36■□□□□ 0.37
APP-211ENST00000462267 CMASQ8NFW8 434 aaPredicted RBP17.36■□□□□ 0.37
APP-211ENST00000462267 RSAD2Q8WXG1 361 aa17.36■□□□□ 0.37
APP-211ENST00000462267 STAMQ92783 540 aa17.36■□□□□ 0.37
APP-211ENST00000462267 EMILIN2Q9BXX0 1053 aa17.36■□□□□ 0.37
APP-211ENST00000462267 AGO4Q9HCK5 861 aaKnown RBP17.36■□□□□ 0.37
APP-211ENST00000462267 NCDNQ9UBB6 729 aa17.36■□□□□ 0.37
APP-211ENST00000462267 EPS15L1Q9UBC2 864 aa17.36■□□□□ 0.37
APP-211ENST00000462267 EVPLQ92817 2033 aa17.35■□□□□ 0.37
APP-211ENST00000462267 SPTLC1O15269 473 aa17.35■□□□□ 0.37
APP-211ENST00000462267 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
APP-211ENST00000462267 ZC3H11AO75152 810 aaKnown RBP eCLIP17.35■□□□□ 0.37
APP-211ENST00000462267 CCNE2O96020 404 aa17.35■□□□□ 0.37
APP-211ENST00000462267 EIF4BP23588 611 aaKnown RBP17.35■□□□□ 0.37
APP-211ENST00000462267 GBP2P32456 591 aaPredicted RBP17.35■□□□□ 0.37
APP-211ENST00000462267 CLCN4P51793 760 aa17.35■□□□□ 0.37
APP-211ENST00000462267 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
APP-211ENST00000462267 ZNF528Q3MIS6 628 aa17.35■□□□□ 0.37
APP-211ENST00000462267 CYP26C1Q6V0L0 522 aa17.35■□□□□ 0.37
APP-211ENST00000462267 CCDC60Q8IWA6 550 aaPredicted RBP17.35■□□□□ 0.37
APP-211ENST00000462267 RHOBTB2Q9BYZ6 727 aa17.35■□□□□ 0.37
APP-211ENST00000462267 ZNF302Q9NR11 478 aa17.35■□□□□ 0.37
APP-211ENST00000462267 ARHGEF3Q9NR81 526 aa17.35■□□□□ 0.37
APP-211ENST00000462267 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
APP-211ENST00000462267 STK39Q9UEW8 545 aa17.35■□□□□ 0.37
APP-211ENST00000462267 CHD8Q9HCK8 2581 aa17.35■□□□□ 0.37
APP-211ENST00000462267 MAGEB2O15479 319 aa17.34■□□□□ 0.37
APP-211ENST00000462267 KLRC2P26717 231 aa17.34■□□□□ 0.37
APP-211ENST00000462267 GNAQP50148 359 aa17.34■□□□□ 0.37
APP-211ENST00000462267 NLRP11P59045 1033 aaKnown RBP17.34■□□□□ 0.37
APP-211ENST00000462267 LMNB2Q03252 620 aa17.34■□□□□ 0.37
APP-211ENST00000462267 CEP55Q53EZ4 464 aa17.34■□□□□ 0.37
APP-211ENST00000462267 CFAP47Q6ZTR5 3102 aa17.34■□□□□ 0.37
APP-211ENST00000462267 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
APP-211ENST00000462267 GPR152Q8TDT2 470 aa17.34■□□□□ 0.37
APP-211ENST00000462267 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
APP-211ENST00000462267 KLHL5Q96PQ7 755 aa17.34■□□□□ 0.37
APP-211ENST00000462267 MAP7D2Q96T17 732 aa17.34■□□□□ 0.37
APP-211ENST00000462267 ADAMTS10Q9H324 1103 aa17.34■□□□□ 0.37
APP-211ENST00000462267 WDR6Q9NNW5 1121 aaKnown RBP17.34■□□□□ 0.37
APP-211ENST00000462267 CACNA1IQ9P0X4 2223 aa17.34■□□□□ 0.37
APP-211ENST00000462267 CDV3Q9UKY7 258 aaKnown RBP17.34■□□□□ 0.37
APP-211ENST00000462267 DDAH1O94760 285 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms