RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 RNF169Q8NCN4 708 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 SLC5A5Q92911 643 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 GJA10Q969M2 543 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 UNC45AQ9H3U1 944 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 SEPT9Q9UHD8 586 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-206ENST00000461217 BARX2Q9UMQ3 279 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-206ENST00000461217 PCDHA4Q9UN74 947 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-206ENST00000461217 DEXIO95424 95 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 EIF4BP23588 611 aaKnown RBP17.02■□□□□ 0.32
COL16A1-206ENST00000461217 EVCP57679 992 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 STK3Q13188 491 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
COL16A1-206ENST00000461217 DSC3Q14574 896 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 CPLX2Q6PUV4 134 aaKnown RBP17.02■□□□□ 0.32
COL16A1-206ENST00000461217 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 NLRP7Q8WX94 980 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 MSLNLQ96KJ4 702 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 LARP6Q9BRS8 491 aaKnown RBP17.02■□□□□ 0.32
COL16A1-206ENST00000461217 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 CLEC1BQ9P126 229 aa17.02■□□□□ 0.32
COL16A1-206ENST00000461217 PER2O15055 1255 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 TDP2O95551 362 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 GPC3P51654 580 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 FAM189BP81408 668 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 BLIDQ8IZY5 108 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 LRRC43Q8N309 656 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 LINC01465Q8N7H1 131 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 KIF2CQ99661 725 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
COL16A1-206ENST00000461217 MUTYHQ9UIF7 546 aa17.01■□□□□ 0.31
COL16A1-206ENST00000461217 FSD2A1L4K1 749 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 EDIL3O43854 480 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 PSMD10O75832 226 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 EYA4O95677 639 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 GLP2RO95838 553 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 SRGAP2BP0DMP2 458 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 FGFR4P22455 802 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 COASYQ13057 564 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 BECN1Q14457 450 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 Q4G0T1 1027 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 PLPP4Q5VZY2 271 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 PDE12Q6L8Q7 609 aaKnown RBP17■□□□□ 0.31
COL16A1-206ENST00000461217 ECHDC2Q86YB7 292 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 RNF135Q8IUD6 432 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 SMRP1Q8NCR6 262 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 RDM1Q8NG50 284 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 ZNF558Q96NG5 402 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 CWH43Q9H720 699 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 ENTPD7Q9NQZ7 604 aa17■□□□□ 0.31
COL16A1-206ENST00000461217 ST18O60284 1047 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 DARSP14868 501 aaKnown RBP16.99■□□□□ 0.31
COL16A1-206ENST00000461217 DNM2P50570 870 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 ERVFC1P60507 584 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL16A1-206ENST00000461217 XKR3Q5GH77 459 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 KCNT2Q6UVM3 1135 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
COL16A1-206ENST00000461217 ZNF274Q96GC6 653 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-206ENST00000461217 CASD1Q96PB1 797 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 CDCA3Q99618 268 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-206ENST00000461217 TCF25Q9BQ70 676 aa16.99■□□□□ 0.31
COL16A1-206ENST00000461217 USP15Q9Y4E8 981 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-206ENST00000461217 TMEM150BA6NC51 233 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 PPM1AP35813 382 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 PBX3P40426 434 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
COL16A1-206ENST00000461217 KRT17Q04695 432 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 DUSP6Q16828 381 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 GALNT17Q6IS24 598 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 KRT25Q7Z3Z0 450 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 DAGLBQ8NCG7 672 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 AIFM3Q96NN9 605 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 SH2D3AQ9BRG2 576 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 GCOM2Q9BZD3 368 aaPredicted RBP16.98■□□□□ 0.31
COL16A1-206ENST00000461217 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 DACT1Q9NYF0 836 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 DDX25Q9UHL0 483 aaKnown RBP16.98■□□□□ 0.31
COL16A1-206ENST00000461217 LZTS1Q9Y250 596 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 MYO7AQ13402 2215 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 WDR81Q562E7 1941 aa16.98■□□□□ 0.31
COL16A1-206ENST00000461217 CYP3A7-CYP3A51PA0A087WV96 503 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 DDX11L8A8MPP1 907 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 CSDE1O75534 798 aaKnown RBP16.97■□□□□ 0.31
COL16A1-206ENST00000461217 CYP3A7P24462 503 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 CA8P35219 290 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 PLCB3Q01970 1234 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 DRP2Q13474 957 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
COL16A1-206ENST00000461217 INF2Q27J81 1249 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 LETM2Q2VYF4 491 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 HERC4Q5GLZ8 1057 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-206ENST00000461217 LRRC55Q6ZSA7 311 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 TMC7Q7Z402 723 aa16.97■□□□□ 0.31
COL16A1-206ENST00000461217 HELQQ8TDG4 1101 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms