RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 VPS52Q8N1B4 723 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 CYP2W1Q8TAV3 490 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 HINFPQ9BQA5 517 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 AGO4Q9HCK5 861 aaKnown RBP19.57■□□□□ 0.72
TOP3A-202ENST00000461127 ZNF302Q9NR11 478 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 GPR32O75388 356 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 PLEKHA8P1O95397 391 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 EPCAMP16422 314 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 ITGB3BPQ13352 177 aaPredicted RBP19.56■□□□□ 0.72
TOP3A-202ENST00000461127 MIS18BP1Q6P0N0 1132 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 CASC1Q6TDU7 716 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 ABHD15Q6UXT9 468 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 TMC5Q6UXY8 1006 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 PPFIBP1Q86W92 1011 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 ZNF710Q8N1W2 664 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 SRBD1Q8N5C6 995 aaKnown RBP19.56■□□□□ 0.72
TOP3A-202ENST00000461127 MAP7D2Q96T17 732 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 IL25Q9H293 177 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 IRAK3Q9Y616 596 aa19.56■□□□□ 0.72
TOP3A-202ENST00000461127 DDX39AO00148 427 aaKnown RBP19.55■□□□□ 0.72
TOP3A-202ENST00000461127 C22orf31O95567 290 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 POLGP54098 1239 aaPredicted RBP19.55■□□□□ 0.72
TOP3A-202ENST00000461127 BCAR1P56945 870 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 CLLU1OSQ5K130 101 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 KANK3Q6NY19 840 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 ZC3H14Q6PJT7 736 aaKnown RBP19.55■□□□□ 0.72
TOP3A-202ENST00000461127 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 HEATR3Q7Z4Q2 680 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 CCDC60Q8IWA6 550 aaPredicted RBP19.55■□□□□ 0.72
TOP3A-202ENST00000461127 ZBP1Q9H171 429 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 SFXN1Q9H9B4 322 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 KCNK12Q9HB15 430 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 LY9Q9HBG7 655 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 IGSF9Q9P2J2 1179 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 CEP131Q9UPN4 1083 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 NCOR2Q9Y618 2525 aa19.55■□□□□ 0.72
TOP3A-202ENST00000461127 CCDC69A6NI79 296 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 ZBTB42B2RXF5 422 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 NT5C1B-RDH14C9J2C7 533 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 CCNE2O96020 404 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 FOSP01100 380 aaPredicted RBP19.54■□□□□ 0.72
TOP3A-202ENST00000461127 TMOD1P28289 359 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 ZNF76P36508 570 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 ANTXR2P58335 489 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 NLRP11P59045 1033 aaKnown RBP19.54■□□□□ 0.72
TOP3A-202ENST00000461127 NUCB1Q02818 461 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 SWSAP1Q6NVH7 229 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 GPR149Q86SP6 731 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 TEX2Q8IWB9 1127 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 CMTR1Q8N1G2 835 aaKnown RBP19.54■□□□□ 0.72
TOP3A-202ENST00000461127 TMTC2Q8N394 836 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 HELQQ8TDG4 1101 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 BBXQ8WY36 941 aaPredicted RBP19.54■□□□□ 0.72
TOP3A-202ENST00000461127 RSPH1Q8WYR4 309 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 AKT3Q9Y243 479 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 DENND4AQ7Z401 1863 aa19.54■□□□□ 0.72
TOP3A-202ENST00000461127 TPRP12270 2363 aaKnown RBP19.53■□□□□ 0.72
TOP3A-202ENST00000461127 A0A0U1RQF3 1178 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 hCG_1642624A0A1W2PR95 340 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 MAGEB2O15479 319 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 CALM1P0DP23 149 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 CALM2P0DP24 149 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 CALM3P0DP25 149 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 CTSAP10619 480 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 EIF4BP23588 611 aaKnown RBP19.53■□□□□ 0.72
TOP3A-202ENST00000461127 NONOQ15233 471 aaKnown RBP eCLIP19.53■□□□□ 0.72
TOP3A-202ENST00000461127 MB21D2Q8IYB1 491 aaPredicted RBP19.53■□□□□ 0.72
TOP3A-202ENST00000461127 SLC22A17Q8WUG5 538 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 AUTS2Q8WXX7 1259 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 EPG5Q9HCE0 2579 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 CEP250Q9BV73 2442 aa19.53■□□□□ 0.72
TOP3A-202ENST00000461127 MYH9P35579 1960 aaKnown RBP19.52■□□□□ 0.72
TOP3A-202ENST00000461127 MEIS1O00470 390 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 ZC3H11AO75152 810 aaKnown RBP eCLIP19.52■□□□□ 0.72
TOP3A-202ENST00000461127 DDX53Q86TM3 631 aaKnown RBP19.52■□□□□ 0.72
TOP3A-202ENST00000461127 CCDC82Q8N4S0 544 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 SCLT1Q96NL6 688 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 MTA3Q9BTC8 594 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 WNT16Q9UBV4 365 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 TCEAL9Q9UHQ7 104 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 R4GN57 208 aa19.52■□□□□ 0.72
TOP3A-202ENST00000461127 DNAH14Q0VDD8 3507 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 CLCN3P51790 818 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 PTH1RQ03431 593 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 NIPA1Q7RTP0 329 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 TRMT1LQ7Z2T5 733 aaKnown RBP19.51■□□□□ 0.71
TOP3A-202ENST00000461127 RUBCNQ92622 972 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 ANO3Q9BYT9 981 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 TAF6LQ9Y6J9 622 aa19.51■□□□□ 0.71
TOP3A-202ENST00000461127 NAPAP54920 295 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 TBC1D8BQ0IIM8 1120 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 LETM2Q2VYF4 491 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 EFCAB12Q6NXP0 572 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 C15orf39Q6ZRI6 1047 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 ZNF598Q86UK7 904 aaKnown RBP19.5■□□□□ 0.71
TOP3A-202ENST00000461127 IGSF21Q96ID5 467 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 PGBD1Q96JS3 809 aa19.5■□□□□ 0.71
TOP3A-202ENST00000461127 EMILIN2Q9BXX0 1053 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms