RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 FGD1P98174 961 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 SETQ01105 290 aaPredicted RBP13.95□□□□□ -0.18
GPNMB-204ENST00000459927 NTRK3Q16288 839 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 REXO1Q8N1G1 1221 aaKnown RBP13.95□□□□□ -0.18
GPNMB-204ENST00000459927 MRPL43Q8N983 215 aaKnown RBP13.95□□□□□ -0.18
GPNMB-204ENST00000459927 LENG9Q96B70 501 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 DISC1Q9NRI5 854 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 AKT3Q9Y243 479 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 A0A0U1RQF3 1178 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 MSH4O15457 936 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 HOXB8P17481 243 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-204ENST00000459927 SIGLEC14Q08ET2 396 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 PLPP4Q5VZY2 271 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 LRRC71Q8N4P6 559 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 FBXL6Q8N531 539 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 PRSS33Q8NF86 280 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 ZNF668Q96K58 619 aaPredicted RBP13.94□□□□□ -0.18
GPNMB-204ENST00000459927 FAM167AQ96KS9 214 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 MAP7D2Q96T17 732 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 PHOX2BQ99453 314 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 PRRX2Q99811 253 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 TCF25Q9BQ70 676 aa13.94□□□□□ -0.18
GPNMB-204ENST00000459927 WDR64B1ANS9 1081 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 DARSP14868 501 aaKnown RBP13.93□□□□□ -0.18
GPNMB-204ENST00000459927 PBX3P40426 434 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 GPC3P51654 580 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
GPNMB-204ENST00000459927 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
GPNMB-204ENST00000459927 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 ZNF598Q86UK7 904 aaKnown RBP13.93□□□□□ -0.18
GPNMB-204ENST00000459927 ABI1Q8IZP0 508 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 BRF1Q92994 677 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 PHKBQ93100 1093 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 ASIC4Q96FT7 647 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 CCDC136Q96JN2 1154 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 RIT2Q99578 217 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 APOL5Q9BWW9 433 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 NIFKQ9BYG3 293 aaKnown RBP13.93□□□□□ -0.18
GPNMB-204ENST00000459927 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 TCEAL9Q9UHQ7 104 aa13.93□□□□□ -0.18
GPNMB-204ENST00000459927 STBD1O95210 358 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 CXCL14O95715 111 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 OATP04181 439 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 SRGAP2BP0DMP2 458 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 FGFR4P22455 802 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 AVPR2P30518 371 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 PTPN5P54829 565 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 TCF15Q12870 199 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 SUGP1Q8IWZ8 645 aaKnown RBP13.92□□□□□ -0.18
GPNMB-204ENST00000459927 SLC39A11Q8N1S5 342 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 RNF169Q8NCN4 708 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 AGXT2Q9BYV1 514 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 CHST12Q9NRB3 414 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 SNX14Q9Y5W7 946 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 WDR81Q562E7 1941 aa13.92□□□□□ -0.18
GPNMB-204ENST00000459927 C2orf71A6NGG8 1288 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 NT5C1B-RDH14C9J2C7 533 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
GPNMB-204ENST00000459927 CDC45O75419 566 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
GPNMB-204ENST00000459927 IFNAR1P17181 557 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
GPNMB-204ENST00000459927 SFNP31947 248 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 HSPA4P34932 840 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 PPM1AP35813 382 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
GPNMB-204ENST00000459927 UGCGQ16739 394 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 PTPN21Q16825 1174 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 BLOC1S2Q6QNY1 142 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 HELQQ8TDG4 1101 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 CASP10Q92851 521 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 GJA10Q969M2 543 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 JAKMIP1Q96N16 626 aaKnown RBP13.91□□□□□ -0.18
GPNMB-204ENST00000459927 CEP89Q96ST8 783 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
GPNMB-204ENST00000459927 ADAM7Q9H2U9 754 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 UNC45AQ9H3U1 944 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 SH3GLB2Q9NR46 395 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
GPNMB-204ENST00000459927 CYP3A7-CYP3A51PA0A087WV96 503 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 GAS7O60861 476 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 PSMD10O75832 226 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 RPS6KB1P23443 525 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 CYP3A7P24462 503 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 JAK3P52333 1124 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 BCAR1P56945 870 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 EVCP57679 992 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 PRKCEQ02156 737 aa13.9□□□□□ -0.18
GPNMB-204ENST00000459927 ITIH3Q06033 890 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms