RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	PPME1	Q9Y570	386 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	KAT6A	Q92794	2004 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783		A0A087WZ62	844 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	SPTLC2	O15270	562 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	ARHGEF15	O94989	841 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	YEATS4	O95619	227 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	EYA4	O95677	639 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	PDIA4	P13667	645 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	GLRA2	P23416	452 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	ARL2	P36404	184 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	LONP1	P36776	959 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	PBX2	P40425	430 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	CRYBB1	P53674	252 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	MAPK7	Q13164	816 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	ZRSR1	Q15695	479 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	PADI6	Q6TGC4	694 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	RHPN2	Q8IUC4	686 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	DAW1	Q8N136	415 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	SLC7A3	Q8WY07	619 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	SYMPK	Q92797	1274 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	AK8	Q96MA6	479 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	ZNF396	Q96N95	335 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	IFIH1	Q9BYX4	1025 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	RAB34	Q9BZG1	259 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	MINDY3	Q9H8M7	445 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	ATP6V0A4	Q9HBG4	840 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	IFT122	Q9HBG6	1241 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	SQOR	Q9Y6N5	450 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	EVPL	Q92817	2033 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	PTPRS	Q13332	1948 aa		11.43	□□□□□ -0.58
MRPL55-223	ENST00000459783	ZBBX	A8MT70	800 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	DGAT1	O75907	488 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	BAIAP3	O94812	1187 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	RPLP2	P05387	115 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	DARS	P14868	501 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	CYP11B2	P19099	503 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	PLCG1	P19174	1290 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	TMOD1	P28289	359 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	RABGGTB	P53611	331 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	LAMTOR4	Q0VGL1	99 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	CAPS	Q13938	189 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	DSC3	Q14574	896 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	STK38	Q15208	465 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	NAALADL2	Q58DX5	795 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	SHC4	Q6S5L8	630 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	MAEA	Q7L5Y9	396 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	KRI1	Q8N9T8	703 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	SEPT8	Q92599	483 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	MTR	Q99707	1265 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	CCSER1	Q9C0I3	900 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	TSHZ2	Q9NRE2	1034 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	RCOR1	Q9UKL0	485 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	YBX2	Q9Y2T7	364 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	COL4A3BP	Q9Y5P4	624 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	COL4A6	Q14031	1691 aa		11.42	□□□□□ -0.58
MRPL55-223	ENST00000459783	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	ARHGEF35	A5YM69	484 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783		M0QZ92	97 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	PPP6R2	O75170	966 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	RPS6KA5	O75582	802 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	MYOG	P15173	224 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	EIF4B	P23588	611 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	UBA7	P41226	1012 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	SLC12A3	P55017	1021 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	ARSH	Q5FYA8	562 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	RINT1	Q6NUQ1	792 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	C1orf186	Q6ZWK4	172 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	SPRED2	Q7Z698	418 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	CRIPAK	Q8N1N5	446 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	LEO1	Q8WVC0	666 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	NLRP7	Q8WX94	980 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	PSPC1	Q8WXF1	523 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	NLRP4	Q96MN2	994 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	PCDHA7	Q9UN72	937 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	ST3GAL5	Q9UNP4	418 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	DNM3	Q9UQ16	869 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	STK24	Q9Y6E0	443 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	SLC4A7	Q9Y6M7	1214 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783		A0A0C4DFX4	3053 aa		11.41	□□□□□ -0.58
MRPL55-223	ENST00000459783	ADGRA3	Q8IWK6	1321 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	ENPP3	O14638	875 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	GAS2	O43903	313 aa	Known RBP	11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	EDN1	P05305	212 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	PLA2G4B	P0C869	781 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	SRGAP2C	P0DJJ0	459 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	ACTN1	P12814	892 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	ATP2A2	P16615	1042 aa	Known RBP	11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	DNM2	P50570	870 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	NFX1	Q12986	1120 aa	Known RBP	11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	PAK2	Q13177	524 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	IKBKE	Q14164	716 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	MCM6	Q14566	821 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	ZNF410	Q86VK4	478 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	HERC6	Q8IVU3	1022 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	SYT2	Q8N9I0	419 aa	Predicted RBP	11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	USP38	Q8NB14	1042 aa		11.4	□□□□□ -0.58
MRPL55-223	ENST00000459783	RNF149	Q8NC42	400 aa		11.4	□□□□□ -0.58

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