RNA–Protein interactions for RNA: ENST00000458625.5

CCL25-204, Transcript of C-C motif chemokine ligand 25, human

TSL 5

Gene CCL25, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCL25-204	ENST00000458625	BCAR1	P56945	870 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	LETM2	Q2VYF4	491 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	CWC27	Q6UX04	472 aa	Known RBP	13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	CABP7	Q86V35	215 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	C1orf210	Q8IVY1	113 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	SLC44A3	Q8N4M1	653 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	RNF169	Q8NCN4	708 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	HELQ	Q8TDG4	1101 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	DSCC1	Q9BVC3	393 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	SFXN1	Q9H9B4	322 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	KCNH7	Q9NS40	1196 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	IGSF9	Q9P2J2	1179 aa		13.63	□□□□□ -0.23
CCL25-204	ENST00000458625	ZZEF1	O43149	2961 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	HOXA2	O43364	376 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	CTSA	P10619	480 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	WTAP	Q15007	396 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	ZC3H14	Q6PJT7	736 aa	Known RBP	13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	ABI1	Q8IZP0	508 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	GPR152	Q8TDT2	470 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	FOXQ1	Q9C009	403 aa		13.62	□□□□□ -0.23
CCL25-204	ENST00000458625	DCDC2B	A2VCK2	349 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	HBP1	O60381	514 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	B4GALT3	O60512	393 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	TGM1	P22735	817 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	PTPN14	Q15678	1187 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	VARS2	Q5ST30	1063 aa	Known RBP	13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	ODR4	Q5SWX8	454 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	PHLDB3	Q6NSJ2	640 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	DDX53	Q86TM3	631 aa	Known RBP	13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	TNPO1	Q92973	898 aa	Known RBP	13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	MYADM	Q96S97	322 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	ADAMTS10	Q9H324	1103 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	SIT1	Q9Y3P8	196 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	TAF6L	Q9Y6J9	622 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	NFASC	O94856	1347 aa		13.61	□□□□□ -0.23
CCL25-204	ENST00000458625	MAFG	O15525	162 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	ALDH7A1	P49419	539 aa	Known RBP	13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	CLCN4	P51793	760 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	POLG	P54098	1239 aa	Predicted RBP	13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	KIAA0319	Q5VV43	1072 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	ABHD15	Q6UXT9	468 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	TMEM169	Q96HH4	297 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	IGSF21	Q96ID5	467 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	ZNF668	Q96K58	619 aa	Predicted RBP	13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	MXRA8	Q9BRK3	442 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	MYL10	Q9BUA6	226 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	SPZ1	Q9BXG8	430 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	PSTPIP2	Q9H939	334 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	PCDHA6	Q9UN73	950 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	PCDHA8	Q9Y5H6	950 aa		13.6	□□□□□ -0.23
CCL25-204	ENST00000458625	COL1A2	P08123	1366 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625		A0A0U1RQF3	1178 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	IFIT3	O14879	490 aa	Known RBP	13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	KIN	O60870	393 aa	Known RBP	13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	PLEKHA8P1	O95397	391 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	ADRB1	P08588	477 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	CNP	P09543	421 aa	Known RBP	13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	SRF	P11831	508 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	FGFR4	P22455	802 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	RFX1	P22670	979 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	CLCN3	P51790	818 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	ZNF484	Q5JVG2	852 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	RRP36	Q96EU6	259 aa	Known RBP	13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	KLHL5	Q96PQ7	755 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	NRDE2	Q9H7Z3	1164 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	AGO4	Q9HCK5	861 aa	Known RBP	13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	ARHGEF3	Q9NR81	526 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	EPS15L1	Q9UBC2	864 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	PATJ	Q8NI35	1801 aa		13.59	□□□□□ -0.23
CCL25-204	ENST00000458625	CEP295	Q9C0D2	2601 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	hCG_1642624	A0A1W2PR95	340 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	MEIS3P2	A8K0S8	358 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	DDX39A	O00148	427 aa	Known RBP	13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	LILRB3	O75022	631 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	GALT	P07902	379 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	SLC26A2	P50443	739 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	ANTXR2	P58335	489 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	NLRP11	P59045	1033 aa	Known RBP	13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	C15orf39	Q6ZRI6	1047 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	CMTR1	Q8N1G2	835 aa	Known RBP	13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	SRBD1	Q8N5C6	995 aa	Known RBP	13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	LINC01465	Q8N7H1	131 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	TMEM87A	Q8NBN3	555 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	PJA1	Q8NG27	643 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	SDF4	Q9BRK5	362 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	WDR6	Q9NNW5	1121 aa	Known RBP	13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	PARD6A	Q9NPB6	346 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	NCDN	Q9UBB6	729 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	DNAJB4	Q9UDY4	337 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	FAM208B	Q5VWN6	2430 aa		13.58	□□□□□ -0.24
CCL25-204	ENST00000458625	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.57	□□□□□ -0.24
CCL25-204	ENST00000458625	MIA3	Q5JRA6	1907 aa		13.57	□□□□□ -0.24
CCL25-204	ENST00000458625	BACH1	O14867	736 aa		13.57	□□□□□ -0.24
CCL25-204	ENST00000458625	CSDE1	O75534	798 aa	Known RBP	13.57	□□□□□ -0.24
CCL25-204	ENST00000458625	SSB	P05455	408 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
CCL25-204	ENST00000458625	MYB	P10242	640 aa		13.57	□□□□□ -0.24
CCL25-204	ENST00000458625	ZSCAN20	P17040	1043 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms