RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 WASF1Q92558 559 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 CENPTQ96BT3 561 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 VMP1Q96GC9 406 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 NR1H4Q96RI1 486 aaPredicted RBP7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 ALG1Q9BT22 464 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 KAT14Q9H8E8 782 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 MYOZ2Q9NPC6 264 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 TCF7L2Q9NQB0 619 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 EFR3BQ9Y2G0 817 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 ZNF541Q9H0D2 1346 aa7.42□□□□□ -1.22
CUBNP3-201ENST00000457461 CFAP73A6NFT4 308 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 UBE2Q2LH0YL09 131 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 AKR1B10O60218 316 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 USO1O60763 962 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 PLEKHA8P1O95397 391 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 FGFR1OPO95684 399 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 LMNB1P20700 586 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GUCY1A2P33402 732 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 MAN1A1P33908 653 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 MLH1P40692 756 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 PEX5P50542 639 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CLCN2P51788 898 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 EIF6P56537 245 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 KRT85P78386 507 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 KIF23Q02241 960 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 TCP10Q12799 353 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 RASA2Q15283 850 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 PCNX4Q63HM2 1172 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 E4F1Q66K89 784 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CCDC174Q6PII3 467 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 NDUFAF2Q8N183 169 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SRBD1Q8N5C6 995 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 PDCD7Q8N8D1 485 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 RUBCNQ92622 972 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 DPF3Q92784 378 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SHISA4Q96DD7 197 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 MS4A4AQ96JQ5 239 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 AIFM3Q96NN9 605 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 NDNQ99608 321 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 HNRNPABQ99729 332 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CCT7Q99832 543 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SYT17Q9BSW7 474 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 NUP58Q9BVL2 599 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SLC26A6Q9BXS9 759 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 TMOD2Q9NZR1 351 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 MAD2L2Q9UI95 211 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 HERC5Q9UII4 1024 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SATB2Q9UPW6 733 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CNPY2Q9Y2B0 182 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 USP27XA6NNY8 438 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GOLGA8KD6RF30 607 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 STRNO43815 780 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 IDH3BO43837 385 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 TTLL1O95922 423 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SYF2O95926 243 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GSTA1P08263 222 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 HSPA1AP0DMV8 641 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 HSPA1BP0DMV9 641 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CCND1P24385 295 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GMPSP49915 693 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 ZNF131P52739 623 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GEMIN4P57678 1058 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 BASP1P80723 227 aaKnown RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 BIRC3Q13489 604 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 COG2Q14746 738 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SLC35G1Q2M3R5 365 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SLC44A4Q53GD3 710 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 KRT40Q6A162 431 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CCSAPQ6IQ19 270 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 TRIM65Q6PJ69 517 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 ZNF365Q70YC5 407 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 EXOC3L1Q86VI1 746 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SCAIQ8N9R8 606 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 ABHD8Q96I13 439 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 L3MBTL3Q96JM7 780 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 CARD6Q9BX69 1037 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SPZ1Q9BXG8 430 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 VCXQ9H320 206 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 GJB4Q9NTQ9 266 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 FKBP14Q9NWM8 211 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 KIAA1522Q9P206 1035 aaPredicted RBP7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 C2CD2Q9Y426 696 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 TIMM22Q9Y584 194 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 FADS3Q9Y5Q0 445 aa7.41□□□□□ -1.22
CUBNP3-201ENST00000457461 PAPPA2Q9BXP8 1791 aa7.4□□□□□ -1.22
CUBNP3-201ENST00000457461 SRCAPQ6ZRS2 3230 aa7.4□□□□□ -1.22
CUBNP3-201ENST00000457461 DOCK1Q14185 1865 aa7.4□□□□□ -1.22
CUBNP3-201ENST00000457461 CLRN2A0PK11 232 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 FRMD3A2A2Y4 597 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 KIF28PB7ZC32 967 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 ATP6V1G2O95670 118 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 MMP1P03956 469 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 SLURP2P0DP57 97 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 PDHBP11177 359 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms