RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MBTPS1Q14703 1052 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.41□□□□□ -1.542e-9■□□□□ 10
GTF3C3-208ENST00000455546 UTP14CQ5TAP6 766 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 ALKBH2Q6NS38 261 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 RIPOR1Q6ZS17 1223 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 LRRC8DQ7L1W4 858 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 CYFIP1Q7L576 1253 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 CATIPQ7Z7H3 387 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 SESTD1Q86VW0 696 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 MB21D2Q8IYB1 491 aaPredicted RBP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 RGL4Q8IZJ4 473 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 ZNF654Q8IZM8 581 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 SRBD1Q8N5C6 995 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 PPTC7Q8NI37 304 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 CAGE1Q8TC20 777 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 PHOSPHO2Q8TCD6 241 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 AFAP1L1Q8TED9 768 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 ATXN2LQ8WWM7 1075 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 MAP4K1Q92918 833 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 ASB16Q96NS5 453 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 MAF1Q9H063 256 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 RNPEPQ9H4A4 650 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 LY9Q9HBG7 655 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 NEUROD4Q9HD90 331 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 MAP3K20Q9NYL2 800 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 THEGQ9P2T0 379 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 GMPR2Q9P2T1 348 aaKnown RBP5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 MTCH2Q9Y6C9 303 aa5.41□□□□□ -1.54
GTF3C3-208ENST00000455546 RSPH10B2B2RC85 870 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 MEIS2O14770 477 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 GPR182O15218 404 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 PRC1O43663 620 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 LPXNO60711 386 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 ATP9AO75110 1047 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 F2P00734 622 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 PDGFAP04085 211 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 LGALS2P05162 132 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 RSPH10BP0C881 870 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SMIM10L2AP0DMW4 78 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SMIM10L2BP0DMW5 78 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 TGFB3P10600 412 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 KCNJ6P48051 423 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 NT5C2P49902 561 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 GHRHRQ02643 423 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 PTSQ03393 145 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 GRB10Q13322 594 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 IKBKEQ14164 716 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 LAPTM4AQ15012 233 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SART3Q15020 963 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 TRIM71Q2Q1W2 868 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 WDR44Q5JSH3 913 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 CNKSR3Q6P9H4 555 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 KCNV1Q6PIU1 500 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 NFXL1Q6ZNB6 911 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 PGBD3Q8N328 593 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 CCDC155Q8N6L0 562 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 DBF4BQ8NFT6 615 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SMARCC2Q8TAQ2 1214 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 GIPC2Q8TF65 315 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 ATP6V0A1Q93050 837 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 RRP36Q96EU6 259 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 TCEANC2Q96MN5 208 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SLC9A7Q96T83 725 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 KATNAL1Q9BW62 490 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 LSG1Q9H089 658 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SUGCTQ9HAC7 445 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 SETD4Q9NVD3 440 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 RAPGEFL1Q9UHV5 662 aa5.4□□□□□ -1.54
GTF3C3-208ENST00000455546 MYH9P35579 1960 aaKnown RBP5.4□□□□□ -1.55
GTF3C3-208ENST00000455546 SIP14410 1827 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 NLRC5Q86WI3 1866 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 WDR81Q562E7 1941 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 ABHD14A-ACY1A0A1B0GW23 586 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 C17orf102A2RUQ5 167 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 CCDC69A6NI79 296 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 NOP56O00567 594 aaKnown RBP5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 SH2B2O14492 632 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 SLC27A2O14975 620 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 BAIAP3O94812 1187 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 CXCL10P02778 98 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 THBS1P07996 1170 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 CTSHP09668 335 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 HOXD8P13378 290 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 ICAM3P32942 547 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 MCM5P33992 734 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 MAPK8P45983 427 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 NECTIN1Q15223 517 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 UBE2SQ16763 222 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 C8orf34Q49A92 452 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 CREB3L3Q68CJ9 461 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 Q6ZNB5 142 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 BTLAQ7Z6A9 289 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 SERINC5Q86VE9 423 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 MYOCDQ8IZQ8 938 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 SAMD3Q8N6K7 520 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 CTCFLQ8NI51 663 aaPredicted RBP5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
GTF3C3-208ENST00000455546 CUL5Q93034 780 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms