RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 GPC3P51654 580 aa19.8■□□□□ 0.76
COPS7A-202ENST00000455113 HTRA4P83105 476 aaPredicted RBP19.8■□□□□ 0.76
COPS7A-202ENST00000455113 RILPL1Q5EBL4 403 aa19.8■□□□□ 0.76
COPS7A-202ENST00000455113 XKR9Q5GH70 373 aa19.8■□□□□ 0.76
COPS7A-202ENST00000455113 TMEM40Q8WWA1 233 aa19.8■□□□□ 0.76
COPS7A-202ENST00000455113 TGS1Q96RS0 853 aaKnown RBP19.8■□□□□ 0.76
COPS7A-202ENST00000455113 RAB34Q9BZG1 259 aa19.8■□□□□ 0.76
COPS7A-202ENST00000455113 LRFN2Q9ULH4 789 aa19.8■□□□□ 0.76
COPS7A-202ENST00000455113 CDH23Q9H251 3354 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 IGKV6-21A0A0C4DH24 114 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 LCHNA4D1U4 455 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 GTPBP6O43824 516 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 GAS2O43903 313 aaKnown RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 NPEPPSP55786 919 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 RHPN2Q8IUC4 686 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 HSD17B14Q9BPX1 270 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 GCOM2Q9BZD3 368 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 INO80BQ9C086 356 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 TSPYL2Q9H2G4 693 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 SUCLA2Q9P2R7 463 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 WRAP73Q9P2S5 460 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 LINC01553A4QN01 128 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 RBAK-RBAKDNI3L0D1 243 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 ZSCAN20P17040 1043 aaPredicted RBP19.79■□□□□ 0.76
COPS7A-202ENST00000455113 HAUS3Q68CZ6 603 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 CLEC17AQ6ZS10 378 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 TCP11Q8WWU5 503 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 ERVK-5Q9HDB9 667 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 C1orf112Q9NSG2 853 aa19.79■□□□□ 0.76
COPS7A-202ENST00000455113 LAD1O00515 517 aa19.78■□□□□ 0.76
COPS7A-202ENST00000455113 TOB1P50616 345 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-202ENST00000455113 ZNF410Q86VK4 478 aa19.78■□□□□ 0.76
COPS7A-202ENST00000455113 ZNF668Q96K58 619 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-202ENST00000455113 ZNF396Q96N95 335 aaPredicted RBP19.78■□□□□ 0.76
COPS7A-202ENST00000455113 CEP89Q96ST8 783 aa19.78■□□□□ 0.76
COPS7A-202ENST00000455113 ADAMTS10Q9H324 1103 aa19.78■□□□□ 0.76
COPS7A-202ENST00000455113 TFIP11Q9UBB9 837 aaKnown RBP19.78■□□□□ 0.76
COPS7A-202ENST00000455113 MTUS1Q9ULD2 1270 aa19.78■□□□□ 0.76
COPS7A-202ENST00000455113 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
COPS7A-202ENST00000455113 TTC3P53804 2025 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 LYPLA2O95372 231 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 NCLP19338 710 aaKnown RBP19.77■□□□□ 0.76
COPS7A-202ENST00000455113 IBSPP21815 317 aaPredicted RBP19.77■□□□□ 0.76
COPS7A-202ENST00000455113 FAM228AQ86W67 206 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 NPAS4Q8IUM7 802 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 FIBCD1Q8N539 461 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 PSPC1Q8WXF1 523 aaKnown RBP19.77■□□□□ 0.76
COPS7A-202ENST00000455113 SAMD11Q96NU1 681 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 GBP4Q96PP9 640 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 MTRQ99707 1265 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 ADAM2Q99965 735 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 DHX33Q9H6R0 707 aaKnown RBP19.77■□□□□ 0.76
COPS7A-202ENST00000455113 TUFT1Q9NNX1 390 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 ANKEF1Q9NU02 776 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 PCDHB7Q9Y5E2 793 aa19.77■□□□□ 0.76
COPS7A-202ENST00000455113 DARSP14868 501 aaKnown RBP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 SFPQP23246 707 aaKnown RBP eCLIP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 KRT85P78386 507 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 PTGDRQ13258 359 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 DRP2Q13474 957 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 NBR1Q14596 966 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 ATL3Q6DD88 541 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 SLC24A5Q71RS6 500 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 SLC17A8Q8NDX2 589 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 SP7Q8TDD2 431 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 NLRP4Q96MN2 994 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 USP28Q96RU2 1077 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 TMX1Q9H3N1 280 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 RGS18Q9NS28 235 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 PCDHB6Q9Y5E3 794 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 DGAT1O75907 488 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 ARHGEF15O94989 841 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 SARSP49591 514 aaKnown RBP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 ERVK-21P61565 698 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 CEBPZQ03701 1054 aaKnown RBP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 EMC2Q15006 297 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 RTN4RL1Q86UN2 441 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 BMP2KQ9NSY1 1161 aaPredicted RBP19.76■□□□□ 0.75
COPS7A-202ENST00000455113 CFAP45Q9UL16 551 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 RWDD3Q9Y3V2 267 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 COL4A3BPQ9Y5P4 624 aa19.76■□□□□ 0.75
COPS7A-202ENST00000455113 ADGRA3Q8IWK6 1321 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 A0A087WZ62 844 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 ASAP2O43150 1006 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 FXR2P51116 673 aaKnown RBP eCLIP19.75■□□□□ 0.75
COPS7A-202ENST00000455113 BTG3Q14201 252 aaPredicted RBP19.75■□□□□ 0.75
COPS7A-202ENST00000455113 LINC01599Q8WXQ3 324 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 PPM1EQ8WY54 764 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 FDXACB1Q9BRP7 624 aaPredicted RBP19.75■□□□□ 0.75
COPS7A-202ENST00000455113 POLR3CQ9BUI4 534 aaPredicted RBP19.75■□□□□ 0.75
COPS7A-202ENST00000455113 ATP6V0A4Q9HBG4 840 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 LRWD1Q9UFC0 647 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 CLIC4Q9Y696 253 aa19.75■□□□□ 0.75
COPS7A-202ENST00000455113 ZBTB39O15060 712 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 DGKIO75912 1065 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 RPA1P27694 616 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 ADGRE1Q14246 886 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 PDIA5Q14554 519 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms