RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 LLPHQ9BRT6 129 aaKnown RBP12.07□□□□□ -0.48
LMCD1-205ENST00000454244 LXNQ9BS40 222 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 PLVAPQ9BX97 442 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 GCOM2Q9BZD3 368 aaPredicted RBP12.07□□□□□ -0.48
LMCD1-205ENST00000454244 LMAN2LQ9H0V9 348 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 CDH23Q9H251 3354 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 UBE2ZQ9H832 354 aaPredicted RBP12.07□□□□□ -0.48
LMCD1-205ENST00000454244 ATP6V0A4Q9HBG4 840 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 CYP26B1Q9NR63 512 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
LMCD1-205ENST00000454244 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
LMCD1-205ENST00000454244 SUCLA2Q9P2R7 463 aaPredicted RBP12.07□□□□□ -0.48
LMCD1-205ENST00000454244 WRAP73Q9P2S5 460 aaPredicted RBP12.07□□□□□ -0.48
LMCD1-205ENST00000454244 A0A087WZ62 844 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 TNFRSF10AO00220 468 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 CSDE1O75534 798 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 FGFR1P11362 822 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 ATP2B1P20020 1258 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 CDC42EP1Q00587 391 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 CYP4A11Q02928 519 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 CTTNQ14247 550 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 CALCRLQ16602 461 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 SPOUT1Q5T280 376 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 RHPN2Q8IUC4 686 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 C4orf19Q8IY42 314 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 JPH2Q9BR39 696 aaPredicted RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 FDXACB1Q9BRP7 624 aaPredicted RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 NSUN3Q9H649 340 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 ELAC1Q9H777 363 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 SH2B1Q9NRF2 756 aaPredicted RBP12.06□□□□□ -0.48
LMCD1-205ENST00000454244 TMEM161AQ9NX61 479 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 PLAGL2Q9UPG8 496 aa12.06□□□□□ -0.48
LMCD1-205ENST00000454244 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 NEMFO60524 1076 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 ITGB1P05556 798 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 KCNA5P22460 613 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 YWHABP31946 246 aaKnown RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 TXKP42681 527 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 RBM25P49756 843 aaKnown RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 XKR9Q5GH70 373 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 EP400NLQ6ZTU2 488 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 ZNF410Q86VK4 478 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 KSR1Q8IVT5 923 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 TPH2Q8IWU9 490 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 RNF169Q8NCN4 708 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 P2RX5Q93086 422 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 NLRP4Q96MN2 994 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 ZSWIM4Q9H7M6 989 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
LMCD1-205ENST00000454244 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 TTC28Q96AY4 2481 aa12.05□□□□□ -0.48
LMCD1-205ENST00000454244 EVPLQ92817 2033 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 ZBTB39O15060 712 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 SLITRK3O94933 977 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 MCM7P33993 719 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 RFC5P40937 340 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 POLGP54098 1239 aaPredicted RBP12.04□□□□□ -0.48
LMCD1-205ENST00000454244 NAALADL2Q58DX5 795 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 FAM184AQ8NB25 1140 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 TMEM143Q96AN5 459 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
LMCD1-205ENST00000454244 TMEM117Q9H0C3 514 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 TMEM60Q9H2L4 133 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
LMCD1-205ENST00000454244 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
LMCD1-205ENST00000454244 TYW1Q9NV66 732 aaKnown RBP12.04□□□□□ -0.48
LMCD1-205ENST00000454244 HOXA2O43364 376 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
LMCD1-205ENST00000454244 DNAJB1P25685 340 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 CAMK1Q14012 370 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 EMC2Q15006 297 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 RABEP1Q15276 862 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 LEXMQ3ZCV2 418 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 CATSPER4Q7RTX7 472 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 ABI1Q8IZP0 508 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 NEK9Q8TD19 979 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 POF1BQ8WVV4 589 aa12.03□□□□□ -0.48
LMCD1-205ENST00000454244 PRPF31Q8WWY3 499 aaKnown RBP12.03□□□□□ -0.48
LMCD1-205ENST00000454244 PSPC1Q8WXF1 523 aaKnown RBP12.03□□□□□ -0.48
LMCD1-205ENST00000454244 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms