RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 PLCB3Q01970 1234 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 KRT32Q14532 448 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 CLLU1OSQ5K130 101 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 PDE12Q6L8Q7 609 aaKnown RBP10□□□□□ -0.81
DEPDC1B-202ENST00000453022 SYCE2Q6PIF2 218 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 TMEM184AQ6ZMB5 413 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 Q6ZUG5 572 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 BRF1Q92994 677 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 PHKBQ93100 1093 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 ZNF668Q96K58 619 aaPredicted RBP10□□□□□ -0.81
DEPDC1B-202ENST00000453022 RPGRIP1Q96KN7 1286 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 TCF25Q9BQ70 676 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 C6orf50Q9HD87 102 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 AKT3Q9Y243 479 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 LZTS1Q9Y250 596 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 C2orf16Q68DN1 1984 aa10□□□□□ -0.81
DEPDC1B-202ENST00000453022 WDR87Q6ZQQ6 2873 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 FSD2A1L4K1 749 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 MSH4O15457 936 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 PRPF3O43395 683 aaKnown RBP9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 CDC45O75419 566 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 OATP04181 439 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 HMGB1P09429 215 aaKnown RBP9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 PRKCEQ02156 737 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 NTRK3Q16288 839 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 MCTP2Q6DN12 878 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 EFCAB12Q6NXP0 572 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 ANKRD54Q6NXT1 300 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 LLGL2Q6P1M3 1020 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 KCNT2Q6UVM3 1135 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 ECHDC2Q86YB7 292 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 LRRC43Q8N309 656 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 CCDC12Q8WUD4 166 aaPredicted RBP9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 KCNB2Q92953 911 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 GJA10Q969M2 543 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 PBXIP1Q96AQ6 731 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 ASIC4Q96FT7 647 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 FAM167AQ96KS9 214 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 APOL5Q9BWW9 433 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 ENTPD7Q9NQZ7 604 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 CDH22Q9UJ99 828 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
DEPDC1B-202ENST00000453022 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 WDR64B1ANS9 1081 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 MAGEB2O15479 319 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 FGFR4P22455 802 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 TECP42680 631 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 GPC3P51654 580 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 FGD1P98174 961 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 DRP2Q13474 957 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 ZNF598Q86UK7 904 aaKnown RBP9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 ZNF558Q96NG5 402 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 MAP7D2Q96T17 732 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 AGXT2Q9BYV1 514 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 DISC1Q9NRI5 854 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 TCEAL9Q9UHQ7 104 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 SNX14Q9Y5W7 946 aa9.98□□□□□ -0.81
DEPDC1B-202ENST00000453022 HOXA2O43364 376 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 CHMP2AO43633 222 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 CSDE1O75534 798 aaKnown RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 DARSP14868 501 aaKnown RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SP100P23497 879 aaPredicted RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 GNA11P29992 359 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 PPM1AP35813 382 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 VCPP55072 806 aaKnown RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SIGLEC14Q08ET2 396 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 TCF15Q12870 199 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 PTPN21Q16825 1174 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SLC39A11Q8N1S5 342 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 FBXL16Q8N461 479 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 RNF169Q8NCN4 708 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 HELQQ8TDG4 1101 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SLC5A5Q92911 643 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 CCDC136Q96JN2 1154 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 CEP89Q96ST8 783 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 RNF26Q9BY78 433 aaPredicted RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 UNC45AQ9H3U1 944 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 NGRNQ9NPE2 291 aaKnown RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SPG21Q9NZD8 308 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 VPS54Q9P1Q0 977 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 HCFC2Q9Y5Z7 792 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 FRYLO94915 3013 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 A0A0U1RQF3 1178 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 TMEM150BA6NC51 233 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 STBD1O95210 358 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SRGAP2BP0DMP2 458 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 ZSCAN20P17040 1043 aaPredicted RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 RPS6KB1P23443 525 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 TMOD1P28289 359 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 HSPA4P34932 840 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 TARBP2Q15633 366 aaKnown RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 CENPQQ7L2Z9 268 aaPredicted RBP9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
DEPDC1B-202ENST00000453022 SUGP1Q8IWZ8 645 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms