RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ADAMTS10Q9H324 1103 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 UPF2Q9HAU5 1272 aaKnown RBP10.85□□□□□ -0.67
USP54-207ENST00000451492 PCDHB7Q9Y5E2 793 aa10.85□□□□□ -0.67
USP54-207ENST00000451492 POTEMA6NI47 508 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 H3BNC9 293 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 ZBTB39O15060 712 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 TBX3O15119 743 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 P4HBP07237 508 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 POU3F3P20264 500 aaPredicted RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 RBM25P49756 843 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 DNM2P50570 870 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 EPHA7Q15375 998 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 TARBP2Q15633 366 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 PTPROQ16827 1216 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 LONRF3Q496Y0 759 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 FAM102BQ5T8I3 360 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 TPH2Q8IWU9 490 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 ATXN2LQ8WWM7 1075 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 HLA-CQ95604 372 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 MRPL38Q96DV4 380 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 EIF2AK1Q9BQI3 630 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 NIFKQ9BYG3 293 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 TTC12Q9H892 705 aaPredicted RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 ALG13Q9NP73 1137 aaKnown RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 CYP26B1Q9NR63 512 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 C1orf112Q9NSG2 853 aa10.84□□□□□ -0.67
USP54-207ENST00000451492 SUCLA2Q9P2R7 463 aaPredicted RBP10.84□□□□□ -0.67
USP54-207ENST00000451492 A0A087WWV3 80 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 C9IYK1 514 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 GRM6O15303 877 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 ST18O60284 1047 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 DKC1O60832 514 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP54-207ENST00000451492 MAFO75444 373 aaPredicted RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 CD2BP2O95400 341 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 LINC00271P0C7V0 271 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 DARSP14868 501 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 EIF4BP23588 611 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 YWHABP31946 246 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 BMPR1AP36894 532 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 HMGN5P82970 282 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 SPIRE1Q08AE8 756 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 NBR1Q14596 966 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 RABEP1Q15276 862 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 ZNF174Q15697 407 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 TCEAL5Q5H9L2 206 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 SLC24A5Q71RS6 500 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 ADAMTS19Q8TE59 1207 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 SLC7A3Q8WY07 619 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 SYMPKQ92797 1274 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 TMEM143Q96AN5 459 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 NECAB3Q96P71 396 aaPredicted RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 CEP89Q96ST8 783 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 LLPHQ9BRT6 129 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 C11orf84Q9BUA3 381 aaPredicted RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 PCDHA12Q9UN75 941 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 PIN4Q9Y237 131 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
USP54-207ENST00000451492 TDRD15B5MCY1 1934 aaKnown RBP10.83□□□□□ -0.68
USP54-207ENST00000451492 C5orf42Q9H799 3197 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 KCNA5P22460 613 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 SFPQP23246 707 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP54-207ENST00000451492 DSC3Q14574 896 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 EMC2Q15006 297 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 TIGD5Q53EQ6 642 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 CATSPER4Q7RTX7 472 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 HELQQ8TDG4 1101 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 CLP1Q92989 425 aaKnown RBP10.82□□□□□ -0.68
USP54-207ENST00000451492 UHRF1Q96T88 793 aaPredicted RBP10.82□□□□□ -0.68
USP54-207ENST00000451492 MTRQ99707 1265 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 IGFLR1Q9H665 355 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 ZSWIM4Q9H7M6 989 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 UBE2ZQ9H832 354 aaPredicted RBP10.82□□□□□ -0.68
USP54-207ENST00000451492 ATP6V0A4Q9HBG4 840 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 LMCD1Q9NZU5 365 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
USP54-207ENST00000451492 IGKV6-21A0A0C4DH24 114 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 C5orf67F2Z3F1 127 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 H3BQ06 376 aaPredicted RBP10.81□□□□□ -0.68
USP54-207ENST00000451492 USO1O60763 962 aaKnown RBP10.81□□□□□ -0.68
USP54-207ENST00000451492 ITGB1P05556 798 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 SRGAP2CP0DJJ0 459 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 PBX3P40426 434 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 TECP42680 631 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 CLUL1Q15846 466 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 MCTP1Q6DN14 999 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 TWF2Q6IBS0 349 aaKnown RBP10.81□□□□□ -0.68
USP54-207ENST00000451492 OTUD6AQ7L8S5 288 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 NOSTRINQ8IVI9 506 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 C4orf19Q8IY42 314 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms