RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 CALM2P0DP24 149 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 CALM3P0DP25 149 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 ATP2B4P23634 1241 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 BLMHQ13867 455 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 TRIP13Q15645 432 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 SLC18A3Q16572 532 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 CAPN12Q6ZSI9 719 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 TTC8Q8TAM2 541 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 DTX3LQ8TDB6 740 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 IFT74Q96LB3 600 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 HAO1Q9UJM8 370 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 USP15Q9Y4E8 981 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 MYH1P12882 1939 aa13.02□□□□□ -0.32
RAB11FIP3-205ENST00000450428 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 KCNJ1P48048 391 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 NAPAP54920 295 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DR1Q01658 176 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 INTS8Q75QN2 995 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 FITM2Q8N6M3 262 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CCHCR1Q8TD31 782 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DDX50Q9BQ39 737 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SYT15Q9BQS2 421 aa13.02□□□□□ -0.33
RAB11FIP3-205ENST00000450428 RASGRF2O14827 1237 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PJA2O43164 708 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 BBOX1O75936 387 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 AMPD3Q01432 767 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 UCMAQ8WVF2 138 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ZC3H12CQ9C0D7 883 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 POLLQ9UGP5 575 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DDX60Q8IY21 1712 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 RAD21O60216 631 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CDK17Q00537 523 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 FGFBP2Q9BYJ0 223 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ERVK-5Q9HDB9 667 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 STX2P32856 288 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 TRAF1Q13077 416 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ANO7Q6IWH7 933 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ZNF571Q7Z3V5 609 aaPredicted RBP13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ATXN2LQ8WWM7 1075 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ARHGEF2Q92974 986 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 C18orf8Q96DM3 657 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 TMEM120BA0PK00 339 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SNX3O60493 162 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ENTPD5O75356 428 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 GFPT2O94808 682 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 OR52Z1P0C646 297 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 GBP1P32455 592 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PDE6CP51160 858 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 USP11P51784 963 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ZC3H18Q86VM9 953 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PNMA1Q8ND90 353 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 MTA3Q9BTC8 594 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 TMEM165Q9HC07 324 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 MYH7P12883 1935 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SCNN1BP51168 640 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PPP2R5BQ15173 497 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ASTE1Q2TB18 679 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CRELD2Q6UXH1 353 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ZSCAN29Q8IWY8 852 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SNX29Q8TEQ0 813 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 RAB17Q9H0T7 212 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 MYH2Q9UKX2 1941 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 NOL4O94818 638 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 LUC7L3O95232 432 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 UBTFL6P0CB48 400 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 CALML3P27482 149 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 IFI16Q16666 785 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 HP1BP3Q5SSJ5 553 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 C12orf60Q5U649 245 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ARL6IP4Q66PJ3 421 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ISLR2Q6UXK2 745 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SPATA21Q7Z572 469 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 SCFD2Q8WU76 684 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DDX12PQ92771 950 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 P3H4Q92791 437 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ERP27Q96DN0 273 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 KLHL14Q9P2G3 628 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PCDHA6Q9UN73 950 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PCDHA8Q9Y5H6 950 aa13□□□□□ -0.33
RAB11FIP3-205ENST00000450428 PPFIA2O75334 1257 aa12.99□□□□□ -0.33
RAB11FIP3-205ENST00000450428 DDAH1O94760 285 aa12.99□□□□□ -0.33
RAB11FIP3-205ENST00000450428 ZNF131P52739 623 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms