RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MAGOHP61326 146 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 MAP3K10Q02779 954 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 STAT4Q14765 748 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PARP10Q53GL7 1025 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 AKNAD1Q5T1N1 836 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 LIN9Q5TKA1 542 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ARHGEF16Q5VV41 709 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KIAA1841Q6NSI8 718 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RWDD4Q6NW29 188 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 RSBN1LQ6PCB5 846 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 ZNF662Q6ZS27 426 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.36□□□□□ -2.03
USP53-202ENST00000450251 TRAPPC11Q7Z392 1133 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CYP2U1Q7Z449 544 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RIC3Q7Z5B4 369 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SPICE1Q8N0Z3 855 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CSGALNACT2Q8N6G5 542 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ST13P5Q8NFI4 369 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 AENQ8WTP8 325 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 MAGOHBQ96A72 148 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 C19orf60Q96EN9 201 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 B3GALT6Q96L58 329 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RNPC3Q96LT9 517 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 DACH2Q96NX9 599 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 FANCEQ9HB96 536 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RIC8AQ9NPQ8 531 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 FBXL5Q9UKA1 691 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CCPG1Q9ULG6 757 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SNX12Q9UMY4 172 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRIM17Q9Y577 477 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PCDHA13Q9Y5I0 950 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GPC6Q9Y625 555 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 MAD1L1Q9Y6D9 718 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ZMYM6O95789 1325 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 AFF2P51816 1311 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MINK1Q8N4C8 1332 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 CARMIL3Q8ND23 1372 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CEP152O94986 1710 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CDC42BPAQ5VT25 1732 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SOWAHDA6NJG2 315 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 POTECB2RU33 542 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KCNK3O14649 394 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SPOPO43791 374 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GFPT2O94808 682 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 POLR3DP05423 398 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 HSPA1AP0DMV8 641 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 HSPA1BP0DMV9 641 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 CHRNA3P32297 505 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 HSPA1LP34931 641 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PTGS2P35354 604 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TNNI2P48788 182 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 DNA2P51530 1060 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KPNA2P52292 529 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 KLHL30Q0D2K2 578 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KYNUQ16719 465 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SPDYAQ5MJ70 313 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RNF43Q68DV7 783 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZFP1Q6P2D0 407 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LRRC74BQ6ZQY2 392 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ADSSL1Q8N142 457 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TCAIMQ8N3R3 496 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 FLCNQ8NFG4 579 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PBXIP1Q96AQ6 731 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 BRIP1Q9BX63 1249 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 UNKQ9C0B0 810 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ANKZF1Q9H8Y5 726 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GPAMQ9HCL2 828 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 FANCLQ9NW38 375 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TXNDC16Q9P2K2 825 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NFU1Q9UMS0 254 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PHF24Q9UPV7 400 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SPG7Q9UQ90 795 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 GPATCH8Q9UKJ3 1502 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ATP7BP35670 1465 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ADCY9O60503 1353 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 H0Y626 953 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PER1O15534 1290 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 TRAPPC3O43617 180 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 IDH1O75874 414 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 KLHL2O95198 593 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 S100A5P33763 92 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MCM7P33993 719 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PGM1P36871 562 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RPL5P46777 297 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 NR1H2P55055 460 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CSE1LP55060 971 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 CDK17Q00537 523 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PPIDQ08752 370 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ZNF846Q147U1 533 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SLC39A14Q15043 492 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RTN1Q16799 776 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZNF394Q53GI3 561 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZNF658Q5TYW1 1059 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 PAPD7Q5XG87 772 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 AAGABQ6PD74 315 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 XKRXQ6PP77 449 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LUZP2Q86TE4 346 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ADCK1Q86TW2 530 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 UNC45BQ8IWX7 931 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SDR16C5Q8N3Y7 309 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms