RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 USP11P51784 963 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 KPNB1Q14974 876 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 CCDC6Q16204 474 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 SLC9C1Q4G0N8 1177 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 VWA3BQ502W6 1294 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 ZC2HC1CQ53FD0 456 aaPredicted RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 SFMBT2Q5VUG0 894 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 SNX30Q5VWJ9 437 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 SEPT14Q6ZU15 432 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 ECHDC2Q86YB7 292 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 ABTB2Q8N961 1025 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 SCG3Q8WXD2 468 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 INPP5DQ92835 1189 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 CELF4Q9BZC1 486 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 INTUQ9ULD6 942 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 USP20Q9Y2K6 914 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 PNPLA7Q6ZV29 1317 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 PXDNQ92626 1479 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 STRCP1A6NGW2 1772 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 ITGA4P13612 1032 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 MYL6BP14649 208 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 ZNF24P17028 368 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 PRSS12P56730 875 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 GUCA2AQ02747 115 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 SLC29A2Q14542 456 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 ZRSR2Q15696 482 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 VSIG1Q86XK7 387 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 STKLD1Q8NE28 680 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 CFAP61Q8NHU2 1237 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 NAP1L3Q99457 506 aaPredicted RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 TRIM51Q9BSJ1 452 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 PHF20Q9BVI0 1012 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 TBC1D10AQ9BXI6 508 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 DENND2DQ9H6A0 471 aaPredicted RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 ZSWIM5Q9P217 1185 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 LARSQ9P2J5 1176 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 RPL26L1Q9UNX3 145 aaKnown RBP9.3□□□□□ -0.92
LSM5-208ENST00000450169 WDR37Q9Y2I8 494 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 hCG_2014768A0A024R1R8 64 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 A0A087WZG4 1122 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 ECE2O60344 883 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 CYP1A1P04798 512 aaPredicted RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 VIL1P09327 827 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 SPATA31D3P0C874 917 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 SLCO1A2P46721 670 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 CBX3Q13185 183 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 ACVR2BQ13705 512 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 IL17AQ16552 155 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 GSTA3Q16772 222 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 SPATA31D4Q6ZUB0 917 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 WDR66Q8TBY9 1149 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 EPS8L3Q8TE67 593 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 XAGE3Q8WTP9 111 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 LRRN4Q8WUT4 740 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 ORAI2Q96SN7 254 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 CENPKQ9BS16 269 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 MIS12Q9H081 205 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 MYLK2Q9H1R3 596 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 DISC1Q9NRI5 854 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 SEC63Q9UGP8 760 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 NFAT5O94916 1531 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 PRPF3O43395 683 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 SERPING1P05155 500 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 EPHB2P29323 1055 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 CCNFP41002 786 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 GJA8P48165 433 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 SLC18A3Q16572 532 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 TNFAIP8L3Q5GJ75 292 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 SOGA3Q5TF21 947 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 COPS6Q7L5N1 327 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 EXOC3L1Q86VI1 746 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 METTL13Q8N6R0 699 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 LENG1Q96BZ8 264 aaPredicted RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 CCDC28BQ9BUN5 200 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 PACSIN1Q9BY11 444 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.92
LSM5-208ENST00000450169 ZDHHC18Q9NUE0 388 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 ETNK2Q9NVF9 386 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 CNOT7Q9UIV1 285 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 HAO1Q9UJM8 370 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 PAIP2BQ9ULR5 123 aaKnown RBP9.29□□□□□ -0.92
LSM5-208ENST00000450169 SLC4A4Q9Y6R1 1079 aa9.29□□□□□ -0.92
LSM5-208ENST00000450169 LRP6O75581 1613 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 KDM4FA0A1W2PPD8 638 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 TMEM120BA0PK00 339 aa9.28□□□□□ -0.92
LSM5-208ENST00000450169 RASGRF2O14827 1237 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms