RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 RAB23Q9ULC3 237 aa9.2□□□□□ -0.94
LINC01961-201ENST00000449954 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.2□□□□□ -0.94
LINC01961-201ENST00000449954 NOP56O00567 594 aaKnown RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 GNAT2P19087 354 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 UBA1P22314 1058 aaKnown RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 CD52P31358 61 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 GATMP50440 423 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 IL31Q6EBC2 164 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 LAIR1Q6GTX8 287 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 MCF2L2Q86YR7 1114 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 MRPL43Q8N983 215 aaKnown RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 SYTL5Q8TDW5 730 aaPredicted RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 NELL1Q92832 810 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 SHDQ96IW2 340 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 TAAR1Q96RJ0 339 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 FAM126AQ9BYI3 521 aaPredicted RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 SFXN1Q9H9B4 322 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 MLXIPQ9HAP2 919 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 SPATA6Q9NWH7 488 aaPredicted RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 MAP10Q9P2G4 905 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 DACH1Q9UI36 760 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 PCDHB7Q9Y5E2 793 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 ITPR1Q14643 2758 aa9.19□□□□□ -0.94
LINC01961-201ENST00000449954 FNDC1Q4ZHG4 1894 aaPredicted RBP9.19□□□□□ -0.94
LINC01961-201ENST00000449954 C2orf71A6NGG8 1288 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 TSPY2A6NKD2 308 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 TAF4O00268 1085 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 CLASP2O75122 1294 aaKnown RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 RETP07949 1114 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 NR3C2P08235 984 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 C1QTNF9P0C862 333 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 GLULP15104 373 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 EIF2AK2P19525 551 aaKnown RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 CSTF1Q05048 431 aaKnown RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 RING1Q06587 406 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 SLFN5Q08AF3 891 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 SPEM2Q0P670 501 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 HSP90AB4PQ58FF6 505 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 MIA3Q5JRA6 1907 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 TTBK2Q6IQ55 1244 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 DCLRE1AQ6PJP8 1040 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 PRR23CQ6ZRP0 262 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 GPR149Q86SP6 731 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 RTN4RL1Q86UN2 441 aaPredicted RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 CLASRPQ8N2M8 674 aaKnown RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 ZNF511Q8NB15 262 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 GPR152Q8TDT2 470 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 HPS1Q92902 700 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 AGO3Q9H9G7 860 aaKnown RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 EPB41L4AQ9HCS5 686 aaPredicted RBP9.18□□□□□ -0.94
LINC01961-201ENST00000449954 COL20A1Q9P218 1284 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 MTMR7Q9Y216 660 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 CDY2AQ9Y6F7 541 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 DMXL2Q8TDJ6 3036 aa9.18□□□□□ -0.94
LINC01961-201ENST00000449954 ABCB11O95342 1321 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 M0QZ92 97 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 IPO8O15397 1037 aaKnown RBP9.17□□□□□ -0.94
LINC01961-201ENST00000449954 SIAH2O43255 324 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 TRIM27P14373 513 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 NOVP48745 357 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 STARD6P59095 220 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 MRPS6P82932 125 aaKnown RBP9.17□□□□□ -0.94
LINC01961-201ENST00000449954 PAK2Q13177 524 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 USH1GQ495M9 461 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 IER5Q5VY09 327 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 C15orf39Q6ZRI6 1047 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 CABP7Q86V35 215 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 C12orf76Q8N812 135 aaPredicted RBP9.17□□□□□ -0.94
LINC01961-201ENST00000449954 STAMQ92783 540 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 GLG1Q92896 1179 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 OSBPL6Q9BZF3 934 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 PXMP2Q9NR77 195 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 SEMA4GQ9NTN9 838 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
LINC01961-201ENST00000449954 TUBE1Q9UJT0 475 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 PADI3Q9ULW8 664 aa9.17□□□□□ -0.94
LINC01961-201ENST00000449954 FRMPD2Q68DX3 1309 aaPredicted RBP9.16□□□□□ -0.94
LINC01961-201ENST00000449954 IGSF9BQ9UPX0 1349 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
LINC01961-201ENST00000449954 SORBS3O60504 671 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 CHGBP05060 677 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 IFIT2P09913 472 aaKnown RBP9.16□□□□□ -0.94
LINC01961-201ENST00000449954 HSPD1P10809 573 aaKnown RBP9.16□□□□□ -0.94
LINC01961-201ENST00000449954 LIMK1P53667 647 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 GIT2Q14161 759 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 PTPN14Q15678 1187 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 CSRP2Q16527 193 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 LETM2Q2VYF4 491 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 KCNT2Q6UVM3 1135 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 TMC5Q6UXY8 1006 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 SLC44A3Q8N4M1 653 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 TMEM87AQ8NBN3 555 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 NACAP1Q9BZK3 213 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 FOXQ1Q9C009 403 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms