RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GRM6O15303 877 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 DRP2Q13474 957 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 SAFBQ15424 915 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHD3-205ENST00000449744 NAALADL2Q58DX5 795 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 TCEAL5Q5H9L2 206 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 ANO5Q75V66 913 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 CCDC83Q8IWF9 413 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 P2RX5Q93086 422 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 ELAC1Q9H777 363 aaKnown RBP17.12■□□□□ 0.33
CHD3-205ENST00000449744 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 AAASQ9NRG9 546 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 TMEM161AQ9NX61 479 aa17.12■□□□□ 0.33
CHD3-205ENST00000449744 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
CHD3-205ENST00000449744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.11■□□□□ 0.33
CHD3-205ENST00000449744 IGKV6-21A0A0C4DH24 114 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 MAFO75444 373 aaPredicted RBP17.11■□□□□ 0.33
CHD3-205ENST00000449744 CSPG5O95196 566 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 KCNA5P22460 613 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 ST3GAL1Q11201 340 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 DSC3Q14574 896 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 CALCRLQ16602 461 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 FAM102BQ5T8I3 360 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 SLC7A3Q8WY07 619 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
CHD3-205ENST00000449744 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 LLPHQ9BRT6 129 aaKnown RBP17.11■□□□□ 0.33
CHD3-205ENST00000449744 LXNQ9BS40 222 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
CHD3-205ENST00000449744 ALG13Q9NP73 1137 aaKnown RBP17.11■□□□□ 0.33
CHD3-205ENST00000449744 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 PLAGL2Q9UPG8 496 aa17.11■□□□□ 0.33
CHD3-205ENST00000449744 TCF20Q9UGU0 1960 aaKnown RBP17.1■□□□□ 0.33
CHD3-205ENST00000449744 A0A087WZ62 844 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 HOXA2O43364 376 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 COL9A1P20849 921 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 FGFR4P22455 802 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
CHD3-205ENST00000449744 NPEPPSP55786 919 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 FAM189BP81408 668 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 ZNF410Q86VK4 478 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 C4orf19Q8IY42 314 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 NECAB3Q96P71 396 aaPredicted RBP17.1■□□□□ 0.33
CHD3-205ENST00000449744 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
CHD3-205ENST00000449744 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 PPME1Q9Y570 386 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 PCDHB12Q9Y5F1 795 aa17.1■□□□□ 0.33
CHD3-205ENST00000449744 NCK2O43639 380 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 NEMFO60524 1076 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 FGFR1P11362 822 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHD3-205ENST00000449744 YWHABP31946 246 aaKnown RBP17.09■□□□□ 0.33
CHD3-205ENST00000449744 RFC5P40937 340 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 CTTNQ14247 550 aaKnown RBP17.09■□□□□ 0.33
CHD3-205ENST00000449744 TPH2Q8IWU9 490 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 KLHL23Q8NBE8 558 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
CHD3-205ENST00000449744 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 WRAP73Q9P2S5 460 aaPredicted RBP17.09■□□□□ 0.33
CHD3-205ENST00000449744 NCOR1O75376 2440 aa17.09■□□□□ 0.33
CHD3-205ENST00000449744 TRANK1O15050 2925 aa17.08■□□□□ 0.33
CHD3-205ENST00000449744 CSDE1O75534 798 aaKnown RBP17.08■□□□□ 0.32
CHD3-205ENST00000449744 ITGB1P05556 798 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 ATP2B1P20020 1258 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 TXKP42681 527 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
CHD3-205ENST00000449744 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 LEXMQ3ZCV2 418 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 XKR9Q5GH70 373 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 SPPL3Q8TCT6 385 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 PABPC5Q96DU9 382 aaKnown RBP17.08■□□□□ 0.32
CHD3-205ENST00000449744 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.32
CHD3-205ENST00000449744 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 CLDND1Q9NY35 253 aa17.08■□□□□ 0.32
CHD3-205ENST00000449744 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
CHD3-205ENST00000449744 KSR1Q8IVT5 923 aa17.07■□□□□ 0.32
CHD3-205ENST00000449744 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
CHD3-205ENST00000449744 NEK9Q8TD19 979 aa17.07■□□□□ 0.32
CHD3-205ENST00000449744 TCP11Q8WWU5 503 aa17.07■□□□□ 0.32
CHD3-205ENST00000449744 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms