RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 NOC4LQ9BVI4 516 aaKnown RBP10.66□□□□□ -0.7
RFC4-210ENST00000449502 FGFBP2Q9BYJ0 223 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 KATNBL1Q9H079 304 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 VPS16Q9H269 839 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 HSD3B7Q9H2F3 369 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 SPC25Q9HBM1 224 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 RNF186Q9NXI6 227 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 IMPACTQ9P2X3 320 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 GJD2Q9UKL4 321 aa10.66□□□□□ -0.7
RFC4-210ENST00000449502 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.7
RFC4-210ENST00000449502 SLC16A4O15374 487 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 LGALS2P05162 132 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 MMP3P08254 477 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 AKR1A1P14550 325 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 ATP4AP20648 1035 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 NR2F2P24468 414 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 CNGA1P29973 690 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 VEGFBP49765 207 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 FLT3LGP49771 235 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 CPT1AP50416 773 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 CASP5P51878 434 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 UBXN1Q04323 297 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 PRKCZQ05513 592 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 STRN3Q13033 797 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 HSP90AA2PQ14568 343 aaPredicted RBP10.65□□□□□ -0.7
RFC4-210ENST00000449502 IER5Q5VY09 327 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 CEP135Q66GS9 1140 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 EPM2AIP1Q7L775 607 aaPredicted RBP10.65□□□□□ -0.7
RFC4-210ENST00000449502 HAUS6Q7Z4H7 955 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 TLK2Q86UE8 772 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 PPFIBP1Q86W92 1011 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 TRIM50Q86XT4 487 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 TMEM143Q96AN5 459 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 HVCN1Q96D96 273 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 BICD1Q96G01 975 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 PCMTD1Q96MG8 357 aaPredicted RBP10.65□□□□□ -0.7
RFC4-210ENST00000449502 NAP1L5Q96NT1 182 aaPredicted RBP10.65□□□□□ -0.7
RFC4-210ENST00000449502 BEGAINQ9BUH8 593 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 ARHGAP39Q9C0H5 1083 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 GBP3Q9H0R5 595 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 SUGCTQ9HAC7 445 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 FLRT1Q9NZU1 646 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 CGNQ9P2M7 1197 aaKnown RBP10.65□□□□□ -0.7
RFC4-210ENST00000449502 TRAF3IP3Q9Y228 551 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 FRMD4BQ9Y2L6 1034 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 Q9Y3F1 56 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 TRPM7Q96QT4 1865 aa10.65□□□□□ -0.7
RFC4-210ENST00000449502 A0A1B0GTH6 734 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 DENND3A2RUS2 1198 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 LRRIQ4A6NIV6 560 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 TULP1O00294 542 aaPredicted RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 MAGEB2O15479 319 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 ZEB2O60315 1214 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 MAFO75444 373 aaPredicted RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 NR3C1P04150 777 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 MYL3P08590 195 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 ZNF865P0CJ78 1059 aaPredicted RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 TMOD1P28289 359 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 NPTX2P47972 431 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 NCKAP1LP55160 1127 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 CHMP4BP1P59074 171 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 SNRPFP62306 86 aaKnown RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 IGBP1P78318 339 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 TFDP1Q14186 410 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 ZC2HC1CQ53FD0 456 aaPredicted RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 TMEM63BQ5T3F8 832 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 CCDC186Q7Z3E2 898 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 ZBTB8OSQ8IWT0 167 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 DAW1Q8N136 415 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 METTL13Q8N6R0 699 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 RAET1EQ8TD07 263 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 PSPC1Q8WXF1 523 aaKnown RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 EEF2KMTQ96G04 330 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 ERO1AQ96HE7 468 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 TUBGCP2Q9BSJ2 902 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 KCTD10Q9H3F6 313 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 ST6GALNAC4Q9H4F1 302 aa10.64□□□□□ -0.71
RFC4-210ENST00000449502 DHX33Q9H6R0 707 aaKnown RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 METTL14Q9HCE5 456 aaKnown RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
RFC4-210ENST00000449502 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■□□□□ 9.9
RFC4-210ENST00000449502 SMCHD1A6NHR9 2005 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 PHLPP2Q6ZVD8 1323 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 LRRC10BA6NIK2 292 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 LGALS16A8MUM7 142 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 H3BRB1 525 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 CLIC2O15247 247 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 SLC16A3O15427 465 aaKnown RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 EXOC3O60645 756 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 KPNA6O60684 536 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 FKTNO75072 461 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 GNRH1P01148 92 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 ZNF286BP0CG31 522 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 MSNP26038 577 aaKnown RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 PSMC2P35998 433 aaKnown RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 ARL2P36404 184 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 NAMPTP43490 491 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 GTF2BQ00403 316 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms