RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 TECP42680 631 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 MRE11P49959 708 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 CLCN3P51790 818 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 JAK3P52333 1124 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 TBC1D8BQ0IIM8 1120 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 ECHDC2Q86YB7 292 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 TRIM22Q8IYM9 498 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 LRRC43Q8N309 656 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 FBXL16Q8N461 479 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 RASGRP4Q8TDF6 673 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 NLRP7Q8WX94 980 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 RSPH1Q8WYR4 309 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 CASD1Q96PB1 797 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 TEKT3Q9BXF9 490 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 RNF26Q9BY78 433 aaPredicted RBP15□□□□□ -0.01
HMGB3-204ENST00000448905 GCOM2Q9BZD3 368 aaPredicted RBP15□□□□□ -0.01
HMGB3-204ENST00000448905 INO80BQ9C086 356 aaPredicted RBP15□□□□□ -0.01
HMGB3-204ENST00000448905 ADAMTS10Q9H324 1103 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 SH3GLB2Q9NR46 395 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 CHST12Q9NRB3 414 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 KAT6AQ92794 2004 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 C5orf42Q9H799 3197 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 A0A0U1RQF3 1178 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 FSCN2O14926 492 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 GLP2RO95838 553 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 SKIP12755 728 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 PLPP4Q5VZY2 271 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 CES5AQ6NT32 575 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 ZBTB33Q86T24 672 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 RDM1Q8NG50 284 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 PHKBQ93100 1093 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 SLC26A6Q9BXS9 759 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 IRF2BPLQ9H1B7 796 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 PCDHGC5Q9Y5F6 944 aa14.99□□□□□ -0.01
HMGB3-204ENST00000448905 RALGAPA2Q2PPJ7 1873 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 MSH4O15457 936 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 DARSP14868 501 aaKnown RBP14.98□□□□□ -0.01
HMGB3-204ENST00000448905 CPA1P15085 419 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 IFNAR1P17181 557 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 HSPA4P34932 840 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 PTPN5P54829 565 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
HMGB3-204ENST00000448905 XKR3Q5GH77 459 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 LRCH2Q5VUJ6 765 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 ANKRD54Q6NXT1 300 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 MRPL43Q8N983 215 aaKnown RBP14.98□□□□□ -0.01
HMGB3-204ENST00000448905 SUSD6Q92537 303 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 CASP10Q92851 521 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 KCNB2Q92953 911 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 MRPL9Q9BYD2 267 aaKnown RBP14.98□□□□□ -0.01
HMGB3-204ENST00000448905 NR2E1Q9Y466 385 aa14.98□□□□□ -0.01
HMGB3-204ENST00000448905 CHMP2AO43633 222 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 REC8O95072 547 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 CXCL14O95715 111 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 RPS6KB1P23443 525 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 GPC3P51654 580 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 PRKCEQ02156 737 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 ITIH3Q06033 890 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 SSRP1Q08945 709 aaKnown RBP14.97□□□□□ -0.01
HMGB3-204ENST00000448905 SIGLEC14Q08ET2 396 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 LLGL2Q6P1M3 1020 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 CPLX2Q6PUV4 134 aaKnown RBP14.97□□□□□ -0.01
HMGB3-204ENST00000448905 LRRC55Q6ZSA7 311 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 MIER3Q7Z3K6 550 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 FBXL6Q8N531 539 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 JPH2Q9BR39 696 aaPredicted RBP14.97□□□□□ -0.01
HMGB3-204ENST00000448905 NIFKQ9BYG3 293 aaKnown RBP14.97□□□□□ -0.01
HMGB3-204ENST00000448905 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 SNX14Q9Y5W7 946 aa14.97□□□□□ -0.01
HMGB3-204ENST00000448905 CPLX1O14810 134 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 ZNF862O60290 1169 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 SFPQP23246 707 aaKnown RBP eCLIP14.96□□□□□ -0.01
HMGB3-204ENST00000448905 PDIA3P30101 505 aaKnown RBP14.96□□□□□ -0.01
HMGB3-204ENST00000448905 CA8P35219 290 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 GIT2Q14161 759 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 Q4G0T1 1027 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 EXOC8Q8IYI6 725 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 TBCKQ8TEA7 893 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 SLC5A5Q92911 643 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 LENG9Q96B70 501 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 TMEM169Q96HH4 297 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 NECTIN4Q96NY8 510 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 VPS54Q9P1Q0 977 aa14.96□□□□□ -0.01
HMGB3-204ENST00000448905 DDX11L8A8MPP1 907 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 HIDE1A8MVS5 230 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 DKC1O60832 514 aaKnown RBP eCLIP14.95□□□□□ -0.02
HMGB3-204ENST00000448905 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
HMGB3-204ENST00000448905 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
HMGB3-204ENST00000448905 KCNC3Q14003 757 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 NTRK3Q16288 839 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 PTPN21Q16825 1174 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 GALNT17Q6IS24 598 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 FAM177A1Q8N128 213 aaPredicted RBP14.95□□□□□ -0.02
HMGB3-204ENST00000448905 VN1R2Q8NFZ6 395 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 HELQQ8TDG4 1101 aa14.95□□□□□ -0.02
HMGB3-204ENST00000448905 ZNF668Q96K58 619 aaPredicted RBP14.95□□□□□ -0.02
HMGB3-204ENST00000448905 RIPOR3Q96MK2 946 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms