RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	KRTAP4-2	Q9BYR5	136 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	TMX4	Q9H1E5	349 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	EHD4	Q9H223	541 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CUEDC2	Q9H467	287 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC86	Q9H6F5	360 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	C6orf50	Q9HD87	102 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CD209	Q9NNX6	404 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	FANCL	Q9NW38	375 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PODXL2	Q9NZ53	605 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SEC63	Q9UGP8	760 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	NFE2L3	Q9Y4A8	694 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	COL4A1	P02462	1669 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CASZ1	Q86V15	1759 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	GAK	O14976	1311 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	AFF2	P51816	1311 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM205A	Q6ZU69	1335 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	MYO3B	Q8WXR4	1341 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	WTIP	A6NIX2	430 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	DBX1	A6NMT0	343 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	FOXN1	O15353	648 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	STX10	O60499	249 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	NMT2	O60551	498 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ICMT	O60725	284 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	SLU7	O95391	586 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	SERPINB2	P05120	415 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	CEACAM5	P06731	702 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	PARP1	P09874	1014 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ATP1A3	P13637	1013 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF18	P17022	549 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	BTD	P43251	543 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	GPSM2	P81274	684 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ID3	Q02535	119 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	PRKCQ	Q04759	706 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	GRIN1	Q05586	938 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAAP100	Q0VG06	881 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	TBX2	Q13207	712 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ORC1	Q13415	861 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	TRIM14	Q14142	442 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	NONO	Q15233	471 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	NPY5R	Q15761	445 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	KIF4B	Q2VIQ3	1234 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPECC1	Q5M775	1068 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ISM2	Q6H9L7	571 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	RCSD1	Q6JBY9	416 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	DTHD1	Q6ZMT9	781 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	C16orf86	Q6ZW13	317 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	PPFIBP1	Q86W92	1011 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	HOMER1	Q86YM7	354 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	RASSF8	Q8NHQ8	419 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	NOC3L	Q8WTT2	800 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	TGFBRAP1	Q8WUH2	860 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC51	Q96ER9	411 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	RRP36	Q96EU6	259 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	EPSTI1	Q96J88	318 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	AK8	Q96MA6	479 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	PANX2	Q96RD6	677 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM129B	Q96TA1	746 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	EYA3	Q99504	573 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	TMEM47	Q9BQJ4	181 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC94	Q9BW85	323 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	COA1	Q9GZY4	146 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	HSD3B7	Q9H2F3	369 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	ATXN3L	Q9H3M9	355 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	PIDD1	Q9HB75	910 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	TRMT1	Q9NXH9	659 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	BARHL2	Q9NY43	387 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	CGN	Q9P2M7	1197 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	EGFL7	Q9UHF1	273 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	STX8	Q9UNK0	236 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.55	□□□□□ -1.68	5e-8	■□□□□ 10.7
PTPN12-208	ENST00000447995	TAF1L	Q8IZX4	1826 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	C10orf71	Q711Q0	1435 aa		4.55	□□□□□ -1.68
PTPN12-208	ENST00000447995	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PLIN4	Q96Q06	1357 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	NAV1	Q8NEY1	1877 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	FLT1	P17948	1338 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ITIH6	Q6UXX5	1313 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	PHLPP2	Q6ZVD8	1323 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	hCG_1642624	A0A1W2PR95	340 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ESYT2	A0FGR8	921 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	KLRG2	A4D1S0	409 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	KLRF2	D3W0D1	207 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	STXBP3	O00186	592 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	LEFTY1	O75610	366 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	FARP2	O94887	1054 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	GYS1	P13807	737 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	BMP6	P22004	513 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	MCM7	P33993	719 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	UBA7	P41226	1012 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	STAT6	P42226	847 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	AFM	P43652	599 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	CDK8	P49336	464 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	NAPA	P54920	295 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	OXCT1	P55809	520 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ETF1	P62495	437 aa	Known RBP	4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	ARHGAP4	P98171	946 aa		4.54	□□□□□ -1.68
PTPN12-208	ENST00000447995	AMPD3	Q01432	767 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms