RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 TCRBV5S4A2TA0A5A2 114 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 CCDC154A6NI56 674 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 RRN3P2A6NIE6 340 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FOXN3O00409 490 aaPredicted RBP4.54□□□□□ -1.68
PMS1-216ENST00000447734 MAN2B1O00754 1011 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FGF10O15520 208 aaPredicted RBP4.54□□□□□ -1.68
PMS1-216ENST00000447734 GAS2O43903 313 aaKnown RBP4.54□□□□□ -1.68
PMS1-216ENST00000447734 NPHS1O60500 1241 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 ZNF205O95201 554 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 CSTBP04080 98 aaKnown RBP4.54□□□□□ -1.68
PMS1-216ENST00000447734 LPLP06858 475 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 COL6A2P12110 1019 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 MYF5P13349 255 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 SSTR4P31391 388 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 RXRGP48443 463 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 CD97P48960 835 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 DUSP4Q13115 394 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 G3BP1Q13283 466 aaKnown RBP eCLIP4.54□□□□□ -1.68
PMS1-216ENST00000447734 MOGSQ13724 837 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 EPHA7Q15375 998 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 MUM1Q2TAK8 710 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 PAN2Q504Q3 1202 aaKnown RBP4.54□□□□□ -1.68
PMS1-216ENST00000447734 CCDC157Q569K6 752 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 RTP2Q5QGT7 225 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FKBP15Q5T1M5 1219 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FAAH2Q6GMR7 532 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FAM180BQ6P0A1 224 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 CYP26C1Q6V0L0 522 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 PRR23CQ6ZRP0 262 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FBXO11Q86XK2 927 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 SYTL1Q8IYJ3 562 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 C7orf31Q8N865 590 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 ZNF527Q8NB42 609 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 RIN2Q8WYP3 895 aaPredicted RBP4.54□□□□□ -1.68
PMS1-216ENST00000447734 DLG3Q92796 817 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 FERMT2Q96AC1 680 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 TMEM41AQ96HV5 264 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 UBXN10Q96LJ8 280 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 PTCHD1Q96NR3 888 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 PPP1R16BQ96T49 567 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 YIPF2Q9BWQ6 316 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 UNC45AQ9H3U1 944 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 KCNH7Q9NS40 1196 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 AP5S1Q9NUS5 200 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 GJD2Q9UKL4 321 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 SRPK3Q9UPE1 567 aa4.54□□□□□ -1.68
PMS1-216ENST00000447734 ITIH6Q6UXX5 1313 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 CNTNAP4Q9C0A0 1308 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 SETD1BQ9UPS6 1966 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 C7orf72A4D263 438 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 POM121BA6NF01 834 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 WTIPA6NIX2 430 aaPredicted RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 NKRFO15226 690 aaKnown RBP eCLIP4.53□□□□□ -1.68
PMS1-216ENST00000447734 SART1O43290 800 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 PAX4O43316 350 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 CLASP2O75122 1294 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 SKAP2O75563 359 aaPredicted RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 CNOT4O95628 575 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 SYPP08247 313 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 NFICP08651 508 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 DHRS4L1P0CG22 281 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 RPL17P18621 184 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 RRM1P23921 792 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 FNTBP49356 437 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 NUCB1Q02818 461 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 CDK5R2Q13319 367 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 SNX17Q15036 470 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 TAF12Q16514 161 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 PITRM1Q5JRX3 1037 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 RETSATQ6NUM9 610 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 APOA5Q6Q788 366 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 CEP68Q76N32 757 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 NLRP10Q86W26 655 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 NME9Q86XW9 330 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 COL23A1Q86Y22 540 aaPredicted RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 LIX1LQ8IVB5 337 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 NLGN4XQ8N0W4 816 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 CCDC33Q8N5R6 958 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 NAT16Q8N8M0 369 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 KLHDC4Q8TBB5 520 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 ZSCAN18Q8TBC5 510 aaPredicted RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 TRAPPC12Q8WVT3 735 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 USP13Q92995 863 aaPredicted RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 APIPQ96GX9 242 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 C16orf92Q96LL3 132 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 SEC62Q99442 399 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 CDADC1Q9BWV3 514 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 SLC26A6Q9BXS9 759 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 ACE2Q9BYF1 805 aaPredicted RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 C22orf23Q9BZE7 217 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.53□□□□□ -1.68
PMS1-216ENST00000447734 MRPL18Q9H0U6 180 aaKnown RBP4.53□□□□□ -1.68
PMS1-216ENST00000447734 SEMA4AQ9H3S1 761 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 SEMA6CQ9H3T2 930 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 EPB41L1Q9H4G0 881 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 IFT122Q9HBG6 1241 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 PNPLA8Q9NP80 782 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 DPP7Q9UHL4 492 aa4.53□□□□□ -1.68
PMS1-216ENST00000447734 ADGRE2Q9UHX3 823 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms