RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RFX7Q2KHR2 1363 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 NVLO15381 856 aaKnown RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 TJP3O95049 919 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 DYNLL1P63167 89 aaKnown RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 KCTD6Q8NC69 237 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 DNAJC9Q8WXX5 260 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 BTBD6Q96KE9 485 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 DHX36Q9H2U1 1008 aaKnown RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 TRIM33Q9UPN9 1127 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 GOLGA8SH3BPF8 625 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 PGM1P36871 562 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 ACAD11Q709F0 780 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 THAP11Q96EK4 314 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 SERPINB13Q9UIV8 391 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 SNX12Q9UMY4 172 aa19.9■□□□□ 0.78
SHANK3-203ENST00000445220 USP15Q9Y4E8 981 aaPredicted RBP19.9■□□□□ 0.78
SHANK3-203ENST00000445220 A0A1W2PQC6 194 aa19.89■□□□□ 0.78
SHANK3-203ENST00000445220 NOP14P78316 857 aaKnown RBP19.89■□□□□ 0.78
SHANK3-203ENST00000445220 AP1B1Q10567 949 aa19.89■□□□□ 0.78
SHANK3-203ENST00000445220 RABGAP1LQ5R372 815 aa19.89■□□□□ 0.78
SHANK3-203ENST00000445220 ATP6V1E2Q96A05 226 aa19.89■□□□□ 0.78
SHANK3-203ENST00000445220 ZNF710Q8N1W2 664 aa19.89■□□□□ 0.78
SHANK3-203ENST00000445220 CCPG1Q9ULG6 757 aa19.89■□□□□ 0.78
SHANK3-203ENST00000445220 PROM2Q8N271 834 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 HNRNPLLQ8WVV9 542 aaKnown RBP19.89■□□□□ 0.77
SHANK3-203ENST00000445220 NACA2Q9H009 215 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 CYLC2Q14093 348 aaPredicted RBP19.89■□□□□ 0.77
SHANK3-203ENST00000445220 TMTC4Q5T4D3 741 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 PIGBQ92521 554 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 WDR11Q9BZH6 1224 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 TCP11X1B4DZS4 312 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 PRKG1Q13976 671 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 MTF1Q14872 753 aa19.89■□□□□ 0.77
SHANK3-203ENST00000445220 R3HDM1Q15032 1099 aaKnown RBP19.89■□□□□ 0.77
SHANK3-203ENST00000445220 BSDC1Q9NW68 430 aaPredicted RBP19.89■□□□□ 0.77
SHANK3-203ENST00000445220 CLTCL1P53675 1640 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 UNC13BO14795 1591 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 TRIM49BA6NDI0 452 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 ZBTB7AO95365 584 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 LONP2Q86WA8 852 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 NRBP2Q9NSY0 501 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 TBC1D23Q9NUY8 699 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 NOC2LQ9Y3T9 749 aaKnown RBP19.88■□□□□ 0.77
SHANK3-203ENST00000445220 ANGPTL3Q9Y5C1 460 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 IQCB1Q15051 598 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 SERPINB4P48594 390 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 TMED10P49755 219 aaKnown RBP19.88■□□□□ 0.77
SHANK3-203ENST00000445220 DHX34Q14147 1143 aaKnown RBP19.88■□□□□ 0.77
SHANK3-203ENST00000445220 UNC13DQ70J99 1090 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 CYFIP2Q96F07 1278 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 SGSM3Q96HU1 749 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 IFRD2Q12894 506 aaPredicted RBP19.88■□□□□ 0.77
SHANK3-203ENST00000445220 THOC5Q13769 683 aaKnown RBP19.88■□□□□ 0.77
SHANK3-203ENST00000445220 TRIM67Q6ZTA4 783 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 CCNYQ8ND76 341 aa19.88■□□□□ 0.77
SHANK3-203ENST00000445220 FAM107AO95990 144 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 PLA2G4BP0C869 781 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 KRT4P19013 534 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 TRPM8Q7Z2W7 1104 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 XPO6Q96QU8 1125 aaKnown RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 PRMT1Q99873 361 aaKnown RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 MED10Q9BTT4 135 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 IRX2Q9BZI1 471 aaPredicted RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 DDX28Q9NUL7 540 aaKnown RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 CDC42BPAQ5VT25 1732 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 KPNA7A9QM74 516 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 ZBED1O96006 694 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 APOA1P02647 267 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 RBM41Q96IZ5 413 aaKnown RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 STX18Q9P2W9 335 aaKnown RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 LZTS1Q9Y250 596 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 PRKAB2O43741 272 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 ZRANB2O95218 330 aaKnown RBP eCLIP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 PRCPP42785 496 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 AGBL2Q5U5Z8 902 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 PIK3R5Q8WYR1 880 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 BRIP1Q9BX63 1249 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 SENP1Q9P0U3 644 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 PHF20L1A8MW92 1017 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 DAB1O75553 588 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 MRPS15P82914 257 aaKnown RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 HIC1Q14526 733 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 RIN2Q8WYP3 895 aaPredicted RBP19.87■□□□□ 0.77
SHANK3-203ENST00000445220 ADPGKQ9BRR6 497 aa19.87■□□□□ 0.77
SHANK3-203ENST00000445220 MED14O60244 1454 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 PPP1R12AO14974 1030 aaPredicted RBP19.86■□□□□ 0.77
SHANK3-203ENST00000445220 ARL4AP40617 200 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 RASGRF1Q13972 1273 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 PI16Q6UXB8 463 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 MXD3Q9BW11 206 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 CHN1P15882 459 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 TRPC1P48995 793 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 GPC5P78333 572 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 FAM83BQ5T0W9 1011 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 BZW1Q7L1Q6 419 aaKnown RBP19.86■□□□□ 0.77
SHANK3-203ENST00000445220 ATP6V0A1Q93050 837 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 SLC12A1Q13621 1099 aa19.86■□□□□ 0.77
SHANK3-203ENST00000445220 DGKHQ86XP1 1220 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms