RNA–Protein interactions for RNA: ENST00000444906.1

SLC4A3-208, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-208ENST00000444906 NEK9Q8TD19 979 aa19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 CLP1Q92989 425 aaKnown RBP19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 TMX3Q96JJ7 454 aa19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 EIF2AK1Q9BQI3 630 aaKnown RBP19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 TMEM60Q9H2L4 133 aa19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 RWDD3Q9Y3V2 267 aa19.3■□□□□ 0.68
SLC4A3-208ENST00000444906 H3BNC9 293 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 SLITRK3O94933 977 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 ATP2B1P20020 1258 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 MCM7P33993 719 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 TXKP42681 527 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 MCM2P49736 904 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 NOSTRINQ8IVI9 506 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 EXOC8Q8IYI6 725 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 NLRP7Q8WX94 980 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 ZNF668Q96K58 619 aaPredicted RBP19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 CEP170P1Q96L14 293 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 SCLT1Q96NL6 688 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 HSD17B14Q9BPX1 270 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 DHX33Q9H6R0 707 aaKnown RBP19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 SUCLA2Q9P2R7 463 aaPredicted RBP19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 LRFN2Q9ULH4 789 aa19.29■□□□□ 0.68
SLC4A3-208ENST00000444906 C5orf67F2Z3F1 127 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 LYPLA2O95372 231 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 RB1P06400 928 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 CTNNB1P35222 781 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 RFC5P40937 340 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 TRAPPC10P48553 1259 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 GNL2Q13823 731 aaKnown RBP19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 OTUD6AQ7L8S5 288 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 ZNF410Q86VK4 478 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 ZNF579Q8NAF0 562 aaKnown RBP19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 ATXN2LQ8WWM7 1075 aaKnown RBP19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 SLC7A3Q8WY07 619 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 GCOM2Q9BZD3 368 aaPredicted RBP19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 PCDHB7Q9Y5E2 793 aa19.28■□□□□ 0.68
SLC4A3-208ENST00000444906 DLL1O00548 723 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 GAS2O43903 313 aaKnown RBP19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 U2AF2P26368 475 aaKnown RBP eCLIP19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 BMPR1AP36894 532 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 POLGP54098 1239 aaPredicted RBP19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 FAM189BP81408 668 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 GPM6BQ13491 265 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 TTC38Q5R3I4 469 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 RHPN2Q8IUC4 686 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 TPH2Q8IWU9 490 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 MRPL38Q96DV4 380 aaKnown RBP19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 ELAC1Q9H777 363 aaKnown RBP19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 TMEM161AQ9NX61 479 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 GTF3C3Q9Y5Q9 886 aa19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 MRPL42Q9Y6G3 142 aaKnown RBP19.27■□□□□ 0.68
SLC4A3-208ENST00000444906 A0A087WZ62 844 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 POTEMA6NI47 508 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 OR52Z1P0C646 297 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 GATMP50440 423 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 SKIV2LQ15477 1246 aaKnown RBP19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 ZNF174Q15697 407 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 PTPROQ16827 1216 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 XKR9Q5GH70 373 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 FDXACB1Q9BRP7 624 aaPredicted RBP19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 COL25A1Q9BXS0 654 aaPredicted RBP19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 ANKEF1Q9NU02 776 aa19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 NOL7Q9UMY1 257 aaKnown RBP19.26■□□□□ 0.67
SLC4A3-208ENST00000444906 ZBTB39O15060 712 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 IBSPP21815 317 aaPredicted RBP19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 FGFR4P22455 802 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 EMC2Q15006 297 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 PAN2Q504Q3 1202 aaKnown RBP19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 TJAP1Q5JTD0 557 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 KSR1Q8IVT5 923 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 PSPC1Q8WXF1 523 aaKnown RBP19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 NLRP4Q96MN2 994 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 C11orf84Q9BUA3 381 aaPredicted RBP19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 PLVAPQ9BX97 442 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 INO80BQ9C086 356 aaPredicted RBP19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 COL4A3BPQ9Y5P4 624 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 CUL9Q8IWT3 2517 aa19.25■□□□□ 0.67
SLC4A3-208ENST00000444906 BRWD1Q9NSI6 2320 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 SFPQP23246 707 aaKnown RBP eCLIP19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 MRPS5P82675 430 aaKnown RBP19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 TIGD5Q53EQ6 642 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 TCP11Q8WWU5 503 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 TMEM143Q96AN5 459 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 MTRQ99707 1265 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 LMAN2LQ9H0V9 348 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 ATP6V0A4Q9HBG4 840 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 COG5Q9UP83 839 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 PLXNA4Q9HCM2 1894 aa19.24■□□□□ 0.67
SLC4A3-208ENST00000444906 CSDE1O75534 798 aaKnown RBP19.23■□□□□ 0.67
SLC4A3-208ENST00000444906 GJB2P29033 226 aa19.23■□□□□ 0.67
SLC4A3-208ENST00000444906 RARRES1P49788 294 aa19.23■□□□□ 0.67
SLC4A3-208ENST00000444906 FAM102BQ5T8I3 360 aa19.23■□□□□ 0.67
SLC4A3-208ENST00000444906 ECHDC2Q86YB7 292 aa19.23■□□□□ 0.67
SLC4A3-208ENST00000444906 PRPF31Q8WWY3 499 aaKnown RBP19.23■□□□□ 0.67
SLC4A3-208ENST00000444906 SYMPKQ92797 1274 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms