RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 Q4G0T1 1027 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 SESTD1Q86VW0 696 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 RHPN2Q8IUC4 686 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 IFT20Q8IY31 132 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 CCDC105Q8IYK2 499 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 ZNF653Q96CK0 615 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 EIF3CQ99613 913 aaKnown RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 TSKSQ9UJT2 592 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 H0YHG0 523 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 TFRCP02786 760 aaKnown RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 FRMD5Q7Z6J6 570 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 IL31RAQ8NI17 732 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 KIAA1683Q9H0B3 1180 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 VWA5AO00534 786 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 AKAP3O75969 853 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 SEPT7Q16181 437 aaKnown RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 LIN9Q5TKA1 542 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 MOB2Q70IA6 237 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 CDR2LQ86X02 465 aaPredicted RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 SPATA33Q96N06 139 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 LACRTQ9GZZ8 138 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 SMARCAL1Q9NZC9 954 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 RASAL2Q9UJF2 1139 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 SIPA1L3O60292 1781 aaPredicted RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 CLDN3O15551 220 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 HPDP32754 393 aaPredicted RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 STAT5BP51692 787 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 PRKCEQ02156 737 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 MOXD1Q6UVY6 613 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 GSPT2Q8IYD1 628 aaKnown RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 SPATA20Q8TB22 786 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 ELMO3Q96BJ8 720 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 FHDC1Q9C0D6 1143 aaPredicted RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 INTS2Q9H0H0 1204 aaKnown RBP11.48□□□□□ -0.57
CALD1-210ENST00000443197 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 NOD1Q9Y239 953 aa11.48□□□□□ -0.57
CALD1-210ENST00000443197 NSFP46459 744 aaKnown RBP11.47□□□□□ -0.57
CALD1-210ENST00000443197 BRD3Q15059 726 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 EDRF1Q3B7T1 1238 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 PASD1Q8IV76 773 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 MMP19Q99542 508 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 HSPBP1Q9NZL4 362 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 CHORDC1Q9UHD1 332 aaPredicted RBP11.47□□□□□ -0.57
CALD1-210ENST00000443197 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
CALD1-210ENST00000443197 IGKV6D-41A0A0C4DH26 115 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 TXNP10599 105 aaKnown RBP11.47□□□□□ -0.57
CALD1-210ENST00000443197 CNTN2Q02246 1040 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 TMEM119Q4V9L6 283 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 SEZ6Q53EL9 994 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 UHMK1Q8TAS1 419 aaKnown RBP11.47□□□□□ -0.57
CALD1-210ENST00000443197 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 ERGIC2Q96RQ1 377 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
CALD1-210ENST00000443197 PDE11AQ9HCR9 933 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 MRFAP1Q9Y605 127 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 LTBP4Q8N2S1 1624 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 GOLGA6BA6NDN3 693 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 PTPRAP18433 802 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 PAF1Q8N7H5 531 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 CBWD1Q9BRT8 395 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 EPB41L5Q9HCM4 733 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 ODF2LQ9ULJ1 636 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
CALD1-210ENST00000443197 SNED1Q8TER0 1413 aa11.47□□□□□ -0.57
CALD1-210ENST00000443197 THAP12O43422 761 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 TNNC2P02585 160 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 FMO5P49326 533 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 LACTBP83111 547 aaPredicted RBP11.46□□□□□ -0.57
CALD1-210ENST00000443197 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 NEDD9Q14511 834 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 TAB3Q8N5C8 712 aaPredicted RBP11.46□□□□□ -0.57
CALD1-210ENST00000443197 MRRFQ96E11 262 aaKnown RBP11.46□□□□□ -0.57
CALD1-210ENST00000443197 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 MED15Q96RN5 788 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 ABCB6Q9NP58 842 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 AGPAT3Q9NRZ7 376 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 ASIC3Q9UHC3 531 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 AGTPBP1Q9UPW5 1226 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 NID2Q14112 1375 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 MYH13Q9UKX3 1938 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
CALD1-210ENST00000443197 PLS3P13797 630 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 KCNJ6P48051 423 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 FKBP1CQ5VVH2 108 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 LRRN4CLQ8ND94 238 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 HSD3B7Q9H2F3 369 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 PXMP2Q9NR77 195 aa11.46□□□□□ -0.57
CALD1-210ENST00000443197 TISP43B9A030 160 aa11.46□□□□□ -0.58
CALD1-210ENST00000443197 ITGB5P18084 799 aa11.46□□□□□ -0.58
CALD1-210ENST00000443197 ACTR2P61160 394 aa11.46□□□□□ -0.58
CALD1-210ENST00000443197 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.58
CALD1-210ENST00000443197 PGM5Q15124 567 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms