RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 FTHL17Q9BXU8 183 aa12.53□□□□□ -0.4
PRKD3-203ENST00000443187 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
PRKD3-203ENST00000443187 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
PRKD3-203ENST00000443187 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
PRKD3-203ENST00000443187 A0A087WZ62 844 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 C9IYK1 514 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 LYPLA2O95372 231 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 OR52Z1P0C646 297 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
PRKD3-203ENST00000443187 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.41
PRKD3-203ENST00000443187 TMOD1P28289 359 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 TECP42680 631 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 MCM2P49736 904 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 CUL4AQ13619 759 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 IL17AQ16552 155 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 MICALL1Q8N3F8 863 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 PIGOQ8TEQ8 1089 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 FDXACB1Q9BRP7 624 aaPredicted RBP12.52□□□□□ -0.41
PRKD3-203ENST00000443187 RGS18Q9NS28 235 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 SUCLA2Q9P2R7 463 aaPredicted RBP12.52□□□□□ -0.41
PRKD3-203ENST00000443187 HCSTQ9UBK5 93 aa12.52□□□□□ -0.41
PRKD3-203ENST00000443187 GPR182O15218 404 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 SARSP49591 514 aaKnown RBP12.51□□□□□ -0.41
PRKD3-203ENST00000443187 FAM189BP81408 668 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
PRKD3-203ENST00000443187 EMC2Q15006 297 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 ECM1Q16610 540 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 XKR9Q5GH70 373 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 CATSPER3Q86XQ3 398 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 NPAS4Q8IUM7 802 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRKD3-203ENST00000443187 PRPF31Q8WWY3 499 aaKnown RBP12.51□□□□□ -0.41
PRKD3-203ENST00000443187 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 MINDY3Q9H8M7 445 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
PRKD3-203ENST00000443187 ADGRA3Q8IWK6 1321 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 KIAA1671Q9BY89 1806 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 NLRC5Q86WI3 1866 aa12.51□□□□□ -0.41
PRKD3-203ENST00000443187 DKC1O60832 514 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRKD3-203ENST00000443187 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
PRKD3-203ENST00000443187 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 RARRES1P49788 294 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 PTGDRQ13258 359 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
PRKD3-203ENST00000443187 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
PRKD3-203ENST00000443187 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 POTEGQ6S5H5 508 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 FIBCD1Q8N539 461 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
PRKD3-203ENST00000443187 NLRP4Q96MN2 994 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
PRKD3-203ENST00000443187 SMC3Q9UQE7 1217 aa12.5□□□□□ -0.41
PRKD3-203ENST00000443187 ATG2AQ2TAZ0 1938 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 DENND3A2RUS2 1198 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 FGFR1P11362 822 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 RFC5P40937 340 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 DNM2P50570 870 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
PRKD3-203ENST00000443187 LAMTOR4Q0VGL1 99 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 BTG3Q14201 252 aaPredicted RBP12.49□□□□□ -0.41
PRKD3-203ENST00000443187 SLC24A5Q71RS6 500 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 ZNF410Q86VK4 478 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 NEK9Q8TD19 979 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 ASAP3Q8TDY4 903 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 SLC7A3Q8WY07 619 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 ANKEF1Q9NU02 776 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
PRKD3-203ENST00000443187 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
PRKD3-203ENST00000443187 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 H3BNC9 293 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 SRGAP2CP0DJJ0 459 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 CDC25AP30304 524 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 CTNNB1P35222 781 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 BMPR1AP36894 532 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 LARP1BQ659C4 914 aaKnown RBP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 OTUD6AQ7L8S5 288 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 ZNF598Q86UK7 904 aaKnown RBP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 FERMT3Q86UX7 667 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 CMTR2Q8IYT2 770 aaKnown RBP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 IGSF22Q8N9C0 903 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 GCOM2Q9BZD3 368 aaPredicted RBP12.48□□□□□ -0.41
PRKD3-203ENST00000443187 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 GPRC5CQ9NQ84 441 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 C1orf112Q9NSG2 853 aa12.48□□□□□ -0.41
PRKD3-203ENST00000443187 PPME1Q9Y570 386 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms