RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 24.4
SLC48A1-202ENST00000442892 CABP7Q86V35 215 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 EXOC8Q8IYI6 725 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 LINC01465Q8N7H1 131 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 TCP11Q8WWU5 503 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 PSPC1Q8WXF1 523 aaKnown RBP13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 USP28Q96RU2 1077 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 TFIP11Q9UBB9 837 aaKnown RBP13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 MSRAQ9UJ68 235 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 PADI3Q9ULW8 664 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 PPME1Q9Y570 386 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 COL4A3BPQ9Y5P4 624 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 KDM3AQ9Y4C1 1321 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 LAMA2P24043 3122 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 DENND3A2RUS2 1198 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 E9PMD0 336 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 CSDE1O75534 798 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 DGAT1O75907 488 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 MYOGP15173 224 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 NCLP19338 710 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 DNAJB2P25686 324 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 UBA7P41226 1012 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 SMAD3P84022 425 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 GRIN1Q05586 938 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 FAM102BQ5T8I3 360 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 Q7L0L9 218 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 HERC6Q8IVU3 1022 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 USP38Q8NB14 1042 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 PBX4Q9BYU1 374 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 GCOM2Q9BZD3 368 aaPredicted RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 POLR3FQ9H1D9 316 aaPredicted RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 BHMT2Q9H2M3 363 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 NKX2-4Q9H2Z4 354 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 DHX33Q9H6R0 707 aaKnown RBP13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 ST3GAL5Q9UNP4 418 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 TCHHQ07283 1943 aa13.58□□□□□ -0.24
SLC48A1-202ENST00000442892 IGKV6-21A0A0C4DH24 114 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 GPR182O15218 404 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 TLL1O43897 1013 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 GAS2O43903 313 aaKnown RBP13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 LAMTOR4Q0VGL1 99 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 RAB30Q15771 203 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 ODR4Q5SWX8 454 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 ZNF697Q5TEC3 545 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 PADI6Q6TGC4 694 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 PRPF31Q8WWY3 499 aaKnown RBP13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 TIFAQ96CG3 184 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 CALML4Q96GE6 196 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 CLIC6Q96NY7 704 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 ADAMTS10Q9H324 1103 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 GPRC5CQ9NQ84 441 aa13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 DBR1Q9UK59 544 aaKnown RBP13.57□□□□□ -0.24
SLC48A1-202ENST00000442892 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 PDIA4P13667 645 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 DARSP14868 501 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 EIF4BP23588 611 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 PTPAQ15257 358 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 TPRNQ4KMQ1 711 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 RNF149Q8NC42 400 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 ASAP3Q8TDY4 903 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 AK8Q96MA6 479 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 FTHL17Q9BXU8 183 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 POLD4Q9HCU8 107 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 ERVK-5Q9HDB9 667 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 XPNPEP1Q9NQW7 623 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 YBX2Q9Y2T7 364 aaKnown RBP13.56□□□□□ -0.24
SLC48A1-202ENST00000442892 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 LRRIQ4A6NIV6 560 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 EYA4O95677 639 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 CA3P07451 260 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 ZSCAN20P17040 1043 aaPredicted RBP13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 LIG1P18858 919 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 MUTP22033 750 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 TXLNAP40222 546 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 PHKA2P46019 1235 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 GRB10Q13322 594 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 TFDP1Q14186 410 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 KARSQ15046 597 aaKnown RBP13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 PPP2R2DQ66LE6 453 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 ZNF410Q86VK4 478 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 MCPH1Q8NEM0 835 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 PHOSPHO2Q8TCD6 241 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms