RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EP400NLQ6ZTU2 488 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 TP53INP2Q8IXH6 220 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 MB21D1Q8N884 522 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 MRPL38Q96DV4 380 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ZNF512BQ96KM6 892 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 DNAJC2Q99543 621 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 RUSC1Q9BVN2 902 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 SPATC1LQ9H0A9 340 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 WNT8AQ9H1J5 351 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 DHX36Q9H2U1 1008 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 SUGCTQ9HAC7 445 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 PIH1D3Q9NQM4 214 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ABI2Q9NYB9 513 aaPredicted RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 HMG20BQ9P0W2 317 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 KANSL3Q9P2N6 904 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 ZBTB21Q9ULJ3 1066 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 DIS3Q9Y2L1 958 aaKnown RBP5.66□□□□□ -1.5
PTPN4-206ENST00000441089 HIF3AQ9Y2N7 669 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 SIPA1L1O43166 1804 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 TNKSO95271 1327 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 UMODL1Q5DID0 1318 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 NLRC5Q86WI3 1866 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 TANC1Q9C0D5 1861 aa5.66□□□□□ -1.5
PTPN4-206ENST00000441089 USP9XQ93008 2570 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-206ENST00000441089 MICAL3Q7RTP6 2002 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 H3BRJ5 948 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 GOLIM4O00461 696 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 BAIAP3O94812 1187 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 RPLP1P05386 114 aaKnown RBP5.65□□□□□ -1.5
PTPN4-206ENST00000441089 UQCRFS1P1P0C7P4 283 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 VCAM1P19320 739 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 SCNN1AP37088 669 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 COG2Q14746 738 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 GORABQ5T7V8 394 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 CDPF1Q6NVV7 123 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 VSIG10LQ86VR7 867 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 NCAPG2Q86XI2 1143 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 FOXP4Q8IVH2 680 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-206ENST00000441089 CRACR2BQ8N4Y2 399 aaPredicted RBP5.65□□□□□ -1.5
PTPN4-206ENST00000441089 MSL3Q8N5Y2 521 aaKnown RBP5.65□□□□□ -1.5
PTPN4-206ENST00000441089 SLC43A3Q8NBI5 491 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 GATA6Q92908 595 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 EVI5LQ96CN4 794 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 ASIC4Q96FT7 647 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 KIAA1683Q9H0B3 1180 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 IGSF5Q9NSI5 407 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 PAG1Q9NWQ8 432 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 TMEM63CQ9P1W3 806 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 CNTN3Q9P232 1028 aa5.65□□□□□ -1.5
PTPN4-206ENST00000441089 MYH1P12882 1939 aa5.65□□□□□ -1.51
PTPN4-206ENST00000441089 MROH7-TTC4A0A0A0MT08 1334 aa5.65□□□□□ -1.51
PTPN4-206ENST00000441089 PARP14Q460N5 1801 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 FOCADQ5VW36 1801 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 GPR75-ASB3A0A0A6YYF3 556 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 A0A0D9SFI3 127 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 FAM170BA6NMN3 283 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 STXBP3O00186 592 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 TIAF1O95411 115 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SLC25A27O95847 323 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 LDHCP07864 332 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SUPT20HL2P0C7V6 817 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 DRD2P14416 443 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SDHBP21912 280 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 MFAP1P55081 439 aaKnown RBP5.64□□□□□ -1.51
PTPN4-206ENST00000441089 GJA9P57773 515 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 RHBDL3P58872 404 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 NMIQ13287 307 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-206ENST00000441089 PLS1Q14651 629 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 TTC39BQ5VTQ0 682 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-206ENST00000441089 FDX2Q6P4F2 183 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 FRMD5Q7Z6J6 570 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 DEFB128Q7Z7B8 93 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 KBTBD3Q8NAB2 608 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SPATA5Q8NB90 893 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SLC7A3Q8WY07 619 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 VWCEQ96DN2 955 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SCLYQ96I15 445 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SPACA7Q96KW9 195 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 FAM227BQ96M60 508 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 RAD9AQ99638 391 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 OSBPL1AQ9BXW6 950 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 UPF3AQ9H1J1 476 aaKnown RBP5.64□□□□□ -1.51
PTPN4-206ENST00000441089 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 CLDND1Q9NY35 253 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 DLL3Q9NYJ7 618 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 MTUS1Q9ULD2 1270 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 FANCMQ8IYD8 2048 aa5.64□□□□□ -1.51
PTPN4-206ENST00000441089 RALGAPA2Q2PPJ7 1873 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 MYADML2A6NDP7 307 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 SGSM2O43147 1006 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 MBTPS2O43462 519 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 GAS2O43903 313 aaKnown RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 NKX3-2P78367 333 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 GSTO1P78417 241 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 SMAD4Q13485 552 aaKnown RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ITGA7Q13683 1181 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ZYXQ15942 572 aaKnown RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF792Q3KQV3 632 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms