RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 C7orf31Q8N865 590 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 MTMR9Q96QG7 549 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 CTAGE1Q96RT6 745 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 ALG2Q9H553 416 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 AZI2Q9H6S1 392 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 PDLIM7Q9NR12 457 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 DISC1Q9NRI5 854 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 TRMT13Q9NUP7 481 aaKnown RBP8.41□□□□□ -1.06
COPS3-203ENST00000439936 SETD4Q9NVD3 440 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 GTF2IRD1Q9UHL9 959 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 NOL7Q9UMY1 257 aaKnown RBP8.41□□□□□ -1.06
COPS3-203ENST00000439936 PCDHA12Q9UN75 941 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 PCDHB6Q9Y5E3 794 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 EMSYQ7Z589 1322 aa8.41□□□□□ -1.06
COPS3-203ENST00000439936 VPS37CA5D8V6 355 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 BACH1O14867 736 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 CHMP2AO43633 222 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 ZIC2O95409 532 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 HSP90AA1P07900 732 aaKnown RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 SMIM10L2AP0DMW4 78 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 SMIM10L2BP0DMW5 78 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 CYP2C9P11712 490 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 INSRRP14616 1297 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 MARK3P27448 753 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 SFNP31947 248 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 TRAPPC10P48553 1259 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 ADAM17P78536 824 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 PPP2R5CQ13362 524 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 PLCB4Q15147 1175 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 CALCRLQ16602 461 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 PTGISQ16647 500 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 TTC38Q5R3I4 469 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 FAM160B1Q5W0V3 765 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 ZBTB33Q86T24 672 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 FERMT3Q86UX7 667 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 CCDC60Q8IWA6 550 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 SMAP1Q8IYB5 467 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 SLFN12Q8IYM2 578 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 AFAP1L1Q8TED9 768 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 TTC12Q9H892 705 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 PRDM5Q9NQX1 630 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 ZNF302Q9NR11 478 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 ERAP1Q9NZ08 941 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 GABBR1Q9UBS5 961 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 PRKAG2Q9UGJ0 569 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 TCEAL9Q9UHQ7 104 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 TBX21Q9UL17 535 aa8.4□□□□□ -1.06
COPS3-203ENST00000439936 ZNF215Q9UL58 517 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 MAFBQ9Y5Q3 323 aaPredicted RBP8.4□□□□□ -1.06
COPS3-203ENST00000439936 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 WDR64B1ANS9 1081 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 TREHO43280 583 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 STX6O43752 255 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 ZNF862O60290 1169 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 HBP1O60381 514 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 NEMFO60524 1076 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 TIMP1P01033 207 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 RAG1P15918 1043 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 HOXC8P31273 242 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 CYP2C18P33260 490 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 JAK3P52333 1124 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 SPIRE1Q08AE8 756 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 ORC2Q13416 577 aaPredicted RBP8.39□□□□□ -1.07
COPS3-203ENST00000439936 EPHA7Q15375 998 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 RILPL1Q5EBL4 403 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 MARCH8Q5T0T0 291 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 TRMT1LQ7Z2T5 733 aaKnown RBP8.39□□□□□ -1.07
COPS3-203ENST00000439936 RDM1Q8NG50 284 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 BADQ92934 168 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 ATP6V0A1Q93050 837 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 GDF15Q99988 308 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 VAV3Q9UKW4 847 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 MTMR6Q9Y217 621 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 UMODL1Q5DID0 1318 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 NRCAMQ92823 1304 aa8.39□□□□□ -1.07
COPS3-203ENST00000439936 RRN3P2A6NIE6 340 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 SLITRK3O94933 977 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 STBD1O95210 358 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 P4HBP07237 508 aaKnown RBP8.38□□□□□ -1.07
COPS3-203ENST00000439936 GNAT1P11488 350 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 CDK11BP21127 795 aaKnown RBP8.38□□□□□ -1.07
COPS3-203ENST00000439936 TECP42680 631 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 MAGEA10P43363 369 aaPredicted RBP8.38□□□□□ -1.07
COPS3-203ENST00000439936 SLC26A2P50443 739 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 RESTQ13127 1097 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 PTK7Q13308 1070 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 GRIK4Q16099 956 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 UGCGQ16739 394 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 FAM173BQ6P4H8 233 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 BRAPQ7Z569 592 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 CKAP2LQ8IYA6 745 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 TRAPPC12Q8WVT3 735 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 DHX38Q92620 1227 aaKnown RBP8.38□□□□□ -1.07
COPS3-203ENST00000439936 TNPO1Q92973 898 aaKnown RBP8.38□□□□□ -1.07
COPS3-203ENST00000439936 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
COPS3-203ENST00000439936 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 HIPK3Q9H422 1215 aa8.38□□□□□ -1.07
COPS3-203ENST00000439936 NRBP2Q9NSY0 501 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms