RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 ELNP15502 786 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 KCNA2P16389 499 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 MUTP22033 750 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 UBA7P41226 1012 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 ADCYAP1R1P41586 468 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 PRAMEF19Q5SWL8 479 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 LINC00528Q8N1L1 170 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 IGSF22Q8N9C0 903 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 NEK9Q8TD19 979 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 PDGFCQ9NRA1 345 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 CCDC39Q9UFE4 941 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
LMO3-207ENST00000439600 PCDHA7Q9UN72 937 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 SAMM50Q9Y512 469 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 PCDHA10Q9Y5I2 948 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
LMO3-207ENST00000439600 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
LMO3-207ENST00000439600 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 PPFIA4O75335 1185 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 UBA1P22314 1058 aaKnown RBP12.15□□□□□ -0.46
LMO3-207ENST00000439600 CMA1P23946 247 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 CPT1AP50416 773 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 CAP1Q01518 475 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 SP2Q02086 613 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 EPHA7Q15375 998 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 ECM1Q16610 540 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 DNAJC14Q6Y2X3 702 aaPredicted RBP12.15□□□□□ -0.46
LMO3-207ENST00000439600 MIER3Q7Z3K6 550 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 CCDC34Q96HJ3 373 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.46
LMO3-207ENST00000439600 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
LMO3-207ENST00000439600 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 PRPF40AO75400 957 aaKnown RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 FARP2O94887 1054 aaPredicted RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 SLC26A2P50443 739 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 UBE2HP62256 183 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 ITGB3BPQ13352 177 aaPredicted RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 COX20Q5RI15 118 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 ALKBH2Q6NS38 261 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 PPTC7Q8NI37 304 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 ZDHHC1Q8WTX9 485 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 CCSER1Q9C0I3 900 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 CSRNP2Q9H175 543 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 AZI2Q9H6S1 392 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 STIM2Q9P246 746 aa12.14□□□□□ -0.47
LMO3-207ENST00000439600 DDX20Q9UHI6 824 aaKnown RBP12.14□□□□□ -0.47
LMO3-207ENST00000439600 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 DDX39AO00148 427 aaKnown RBP12.13□□□□□ -0.47
LMO3-207ENST00000439600 ARIH2O95376 493 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 AVPP01185 164 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 XRCC6P12956 609 aaKnown RBP eCLIP12.13□□□□□ -0.47
LMO3-207ENST00000439600 RPA1P27694 616 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 ACTR2P61160 394 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 NKX3-2P78367 333 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 DGKDQ16760 1214 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
LMO3-207ENST00000439600 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 PCSK9Q8NBP7 692 aaKnown RBP12.13□□□□□ -0.47
LMO3-207ENST00000439600 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 ATP6V0A1Q93050 837 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 SMARCAD1Q9H4L7 1026 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 DCTN4Q9UJW0 460 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 VAV3Q9UKW4 847 aa12.13□□□□□ -0.47
LMO3-207ENST00000439600 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
LMO3-207ENST00000439600 KDM3AQ9Y4C1 1321 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 MYH6P13533 1939 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.12□□□□□ -0.47
LMO3-207ENST00000439600 CHMP2AO43633 222 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 CCT6AP40227 531 aaKnown RBP12.12□□□□□ -0.47
LMO3-207ENST00000439600 QARSP47897 775 aaKnown RBP12.12□□□□□ -0.47
LMO3-207ENST00000439600 GJA9P57773 515 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 PSMC5P62195 406 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 ARHGAP1Q07960 439 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 SPIRE1Q08AE8 756 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 IL17AQ16552 155 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms