RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 DGAT1O75907 488 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 GRB10Q13322 594 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 SPECC1Q5M775 1068 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 KCNK18Q7Z418 384 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 KSR1Q8IVT5 923 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 LINC00301Q8NCQ3 95 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 NLRP7Q8WX94 980 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 SCLT1Q96NL6 688 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 DNM3Q9UQ16 869 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 TTC3P53804 2025 aa21.68■■□□□ 1.06
SEMA3B-206ENST00000439487 SZT2Q5T011 3432 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 A0A087WZ62 844 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 ABHD14A-ACY1A0A1B0GW23 586 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 UBA7P41226 1012 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 FXR1P51114 621 aaKnown RBP eCLIP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 WDR5P61964 334 aaKnown RBP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 DNM1Q05193 864 aaKnown RBP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 HYIQ5T013 277 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 PADI6Q6TGC4 694 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 USP38Q8NB14 1042 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 TCP11Q8WWU5 503 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 PRPF31Q8WWY3 499 aaKnown RBP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 PSPC1Q8WXF1 523 aaKnown RBP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 APBB2Q92870 758 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 CDK5RAP3Q96JB5 506 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 FDXACB1Q9BRP7 624 aaPredicted RBP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 BHMT2Q9H2M3 363 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 PADI3Q9ULW8 664 aa21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 MORC2Q9Y6X9 1032 aaPredicted RBP21.67■■□□□ 1.06
SEMA3B-206ENST00000439487 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 SPTLC2O15270 562 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 GAS2O43903 313 aaKnown RBP21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 RPS6KA5O75582 802 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 EYA4O95677 639 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 KCNJ6P48051 423 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 DEFB103AP81534 67 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 NFX1Q12986 1120 aaKnown RBP21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 PAK2Q13177 524 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 USP49Q70CQ1 688 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 MAEAQ7L5Y9 396 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 ZNF710Q8N1W2 664 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 KRI1Q8N9T8 703 aaKnown RBP21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 LRCH3Q96II8 777 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 EPSTI1Q96J88 318 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 NLRP4Q96MN2 994 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 COL4A3BPQ9Y5P4 624 aa21.66■■□□□ 1.06
SEMA3B-206ENST00000439487 YEATS4O95619 227 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 CDC42EP1Q00587 391 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 LAMTOR4Q0VGL1 99 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 KARSQ15046 597 aaKnown RBP21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 TMEM119Q4V9L6 283 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 FAM228AQ86W67 206 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 CALML4Q96GE6 196 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 CHAMP1Q96JM3 812 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 NT5C3AQ9H0P0 336 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 ERVK-5Q9HDB9 667 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 ST3GAL5Q9UNP4 418 aa21.65■■□□□ 1.06
SEMA3B-206ENST00000439487 EFCAB14O75071 495 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 CSDE1O75534 798 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 SRGAP2CP0DJJ0 459 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 DARSP14868 501 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 ATP2A2P16615 1042 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 CYP11B2P19099 503 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 FGFR4P22455 802 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 EIF4BP23588 611 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 ARL2P36404 184 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 ATL3Q6DD88 541 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 TMCO2Q7Z6W1 182 aaPredicted RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 ZNF410Q86VK4 478 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 ASAP3Q8TDY4 903 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 SYMPKQ92797 1274 aaKnown RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 SLC9A7Q96T83 725 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 GCOM2Q9BZD3 368 aaPredicted RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 CCSER1Q9C0I3 900 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 POLR3FQ9H1D9 316 aaPredicted RBP21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 GPRC5CQ9NQ84 441 aa21.64■■□□□ 1.05
SEMA3B-206ENST00000439487 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 GPR182O15218 404 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 ASAP2O43150 1006 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 SLC26A4O43511 780 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 PPP6R2O75170 966 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 DDIT3P35638 169 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 ANP32AP39687 249 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 SMAD3P84022 425 aaKnown RBP21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 FAM102BQ5T8I3 360 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 MCPH1Q8NEM0 835 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 RASSF8Q8NHQ8 419 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 TMX1Q9H3N1 280 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 POLD4Q9HCU8 107 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 CFAP45Q9UL16 551 aa21.63■■□□□ 1.05
SEMA3B-206ENST00000439487 ENPP3O14638 875 aa21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 AMHP03971 560 aa21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 SSBP05455 408 aaKnown RBP eCLIP21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 PLCG1P19174 1290 aa21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 GLRA2P23416 452 aa21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 RABGGTBP53611 331 aa21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 MXD4Q14582 209 aaPredicted RBP21.62■■□□□ 1.05
SEMA3B-206ENST00000439487 ODR4Q5SWX8 454 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms