RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 MRPL38Q96DV4 380 aaKnown RBP15.52■□□□□ 0.08
PRAME-209ENST00000439106 C8orf76Q96K31 380 aa15.52■□□□□ 0.08
PRAME-209ENST00000439106 CYP26B1Q9NR63 512 aa15.52■□□□□ 0.08
PRAME-209ENST00000439106 RGS18Q9NS28 235 aa15.52■□□□□ 0.08
PRAME-209ENST00000439106 LMCD1Q9NZU5 365 aa15.52■□□□□ 0.08
PRAME-209ENST00000439106 A0A087WZ62 844 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 IGKV6-21A0A0C4DH24 114 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 TBKBP1A7MCY6 615 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 NEMFO60524 1076 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 MAFO75444 373 aaPredicted RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 FGFR1P11362 822 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 BMPR1AP36894 532 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 TXKP42681 527 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 DSC3Q14574 896 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 EPHA7Q15375 998 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 CALCRLQ16602 461 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 CMTR2Q8IYT2 770 aaKnown RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 ADAMTS19Q8TE59 1207 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 CLP1Q92989 425 aaKnown RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 FDXACB1Q9BRP7 624 aaPredicted RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 TMEM60Q9H2L4 133 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 ALG13Q9NP73 1137 aaKnown RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 PCDHB7Q9Y5E2 793 aa15.51■□□□□ 0.07
PRAME-209ENST00000439106 TDRD15B5MCY1 1934 aaKnown RBP15.51■□□□□ 0.07
PRAME-209ENST00000439106 A0A087WWV3 80 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 POTEMA6NI47 508 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 CD2BP2O95400 341 aaKnown RBP15.5■□□□□ 0.07
PRAME-209ENST00000439106 BAG4O95429 457 aaKnown RBP15.5■□□□□ 0.07
PRAME-209ENST00000439106 DARSP14868 501 aaKnown RBP15.5■□□□□ 0.07
PRAME-209ENST00000439106 MCM7P33993 719 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 TCEAL5Q5H9L2 206 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 ODR4Q5SWX8 454 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 SLC24A5Q71RS6 500 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 TPH2Q8IWU9 490 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 SLFN12Q8IYM2 578 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 HLA-CQ95604 372 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 CEP170P1Q96L14 293 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 ZSCAN31Q96LW9 406 aaPredicted RBP15.5■□□□□ 0.07
PRAME-209ENST00000439106 NLRP4Q96MN2 994 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 C1orf112Q9NSG2 853 aa15.5■□□□□ 0.07
PRAME-209ENST00000439106 SUCLA2Q9P2R7 463 aaPredicted RBP15.5■□□□□ 0.07
PRAME-209ENST00000439106 C5orf67F2Z3F1 127 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 YWHABP31946 246 aaKnown RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 NBR1Q14596 966 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 PTPROQ16827 1216 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 C4orf19Q8IY42 314 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 FAM184AQ8NB25 1140 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 RNF169Q8NCN4 708 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 IL27Q8NEV9 243 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 SYMPKQ92797 1274 aaKnown RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 TMEM143Q96AN5 459 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 EIF2AK1Q9BQI3 630 aaKnown RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 LLPHQ9BRT6 129 aaKnown RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 C11orf84Q9BUA3 381 aaPredicted RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 TTC12Q9H892 705 aaPredicted RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
PRAME-209ENST00000439106 PCDHA12Q9UN75 941 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 COG5Q9UP83 839 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 RWDD3Q9Y3V2 267 aa15.49■□□□□ 0.07
PRAME-209ENST00000439106 MYH11P35749 1972 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 SLITRK3O94933 977 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 ITGB1P05556 798 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 BMP1P13497 986 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 ZSCAN20P17040 1043 aaPredicted RBP15.48■□□□□ 0.07
PRAME-209ENST00000439106 DNAJB1P25685 340 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 DNM2P50570 870 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
PRAME-209ENST00000439106 EMC2Q15006 297 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 RABEP1Q15276 862 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 SAFBQ15424 915 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRAME-209ENST00000439106 ZNF174Q15697 407 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 TIGD5Q53EQ6 642 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 XKR9Q5GH70 373 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 SPOUT1Q5T280 376 aaKnown RBP15.48■□□□□ 0.07
PRAME-209ENST00000439106 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 KLHL23Q8NBE8 558 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 MTMR9Q96QG7 549 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 UHRF1Q96T88 793 aaPredicted RBP15.48■□□□□ 0.07
PRAME-209ENST00000439106 UBE2ZQ9H832 354 aaPredicted RBP15.48■□□□□ 0.07
PRAME-209ENST00000439106 ATP6V0A4Q9HBG4 840 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 RNF19AQ9NV58 838 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 TMEM161AQ9NX61 479 aa15.48■□□□□ 0.07
PRAME-209ENST00000439106 DKC1O60832 514 aaKnown RBP eCLIP15.47■□□□□ 0.07
PRAME-209ENST00000439106 RB1P06400 928 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 KCNA5P22460 613 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.072e-7■■■■□ 20.3
PRAME-209ENST00000439106 HMGN5P82970 282 aaKnown RBP15.47■□□□□ 0.07
PRAME-209ENST00000439106 CAMK1Q14012 370 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 LONRF3Q496Y0 759 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 FBXO18Q8NFZ0 1043 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 GCOM2Q9BZD3 368 aaPredicted RBP15.47■□□□□ 0.07
PRAME-209ENST00000439106 NSUN3Q9H649 340 aaKnown RBP15.47■□□□□ 0.07
PRAME-209ENST00000439106 DHX33Q9H6R0 707 aaKnown RBP15.47■□□□□ 0.07
PRAME-209ENST00000439106 ZSWIM4Q9H7M6 989 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 XPNPEP1Q9NQW7 623 aa15.47■□□□□ 0.07
PRAME-209ENST00000439106 TYW1Q9NV66 732 aaKnown RBP15.47■□□□□ 0.07
PRAME-209ENST00000439106 PLAGL2Q9UPG8 496 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms