RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 Q4G0T1 1027 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 LRRC43Q8N309 656 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 COLGALT1Q8NBJ5 622 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 SMRP1Q8NCR6 262 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 TBCKQ8TEA7 893 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 SLC5A5Q92911 643 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 MSLNLQ96KJ4 702 aa16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 JPH2Q9BR39 696 aaPredicted RBP16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 TYW1Q9NV66 732 aaKnown RBP16.76■□□□□ 0.27
RPUSD3-208ENST00000433972 LINC01565O15544 149 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 CDKL5O76039 1030 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 XBP1P17861 261 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 IRS1P35568 1242 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 PLCB3Q01970 1234 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 DSC3Q14574 896 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 FAM102BQ5T8I3 360 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 BLIDQ8IZY5 108 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 NLRP7Q8WX94 980 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 KCNH6Q9H252 994 aa16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 NGRNQ9NPE2 291 aaKnown RBP16.75■□□□□ 0.27
RPUSD3-208ENST00000433972 CYP3A7-CYP3A51PA0A087WV96 503 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 ZNF862O60290 1169 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 DKC1O60832 514 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 EOMESO95936 686 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 FGFR1P11362 822 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 DARSP14868 501 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 CYP3A7P24462 503 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 GPC3P51654 580 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 RBM23Q86U06 439 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 LRRC71Q8N4P6 559 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 DAGLBQ8NCG7 672 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 MRPS27Q92552 414 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 ZNF558Q96NG5 402 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 MRPL9Q9BYD2 267 aaKnown RBP16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 GCOM2Q9BZD3 368 aaPredicted RBP16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 ADAMTS10Q9H324 1103 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 UNC45AQ9H3U1 944 aa16.74■□□□□ 0.27
RPUSD3-208ENST00000433972 ADAMTS3O15072 1205 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 PSMD10O75832 226 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 SKIP12755 728 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 NEK4P51957 841 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 NONOQ15233 471 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 KRT25Q7Z3Z0 450 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 ECHDC2Q86YB7 292 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 EXOC8Q8IYI6 725 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 MFSD14AQ96MC6 490 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 NIFKQ9BYG3 293 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 CWH43Q9H720 699 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 ENTPD7Q9NQZ7 604 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 CHST12Q9NRB3 414 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 CLEC1BQ9P126 229 aa16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 SEPT9Q9UHD8 586 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-208ENST00000433972 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 DUSP6Q16828 381 aa16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 KCNT2Q6UVM3 1135 aa16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 ZNF410Q86VK4 478 aa16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 CASD1Q96PB1 797 aa16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 DDX25Q9UHL0 483 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-208ENST00000433972 GCFC2P16383 781 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 ATF7P17544 494 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 TARBP2Q15633 366 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 UGCGQ16739 394 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 MTERF2Q49AM1 385 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 RNF169Q8NCN4 708 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 TCF25Q9BQ70 676 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 PHF7Q9BWX1 381 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 SPG21Q9NZD8 308 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 BARX2Q9UMQ3 279 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 PPME1Q9Y570 386 aa16.71■□□□□ 0.27
RPUSD3-208ENST00000433972 CCDC194A0A1B0GVG4 234 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 FSCN2O14926 492 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 TDP2O95551 362 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 GLP2RO95838 553 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 HOXB8P17481 243 aaPredicted RBP16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 ALDH7A1P49419 539 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 PSMC5P62195 406 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 PLPP4Q5VZY2 271 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 TMEM184AQ6ZMB5 413 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 TMC7Q7Z402 723 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 ETNPPLQ8TBG4 499 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 FAM20AQ96MK3 541 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 TRAIPQ9BWF2 469 aa16.7■□□□□ 0.26
RPUSD3-208ENST00000433972 MUTYHQ9UIF7 546 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms