RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 TECP42680 631 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 GRB10Q13322 594 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 XKR9Q5GH70 373 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 ZNF410Q86VK4 478 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 ZNF689Q96CS4 500 aaPredicted RBP17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 ADAM2Q99965 735 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 ADGRA3Q8IWK6 1321 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
TSPAN9-203ENST00000431374 A0A087WZ62 844 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 SPATA31C1P0DKV0 1188 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 EMC2Q15006 297 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 RHPN2Q8IUC4 686 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 GDPD5Q8WTR4 605 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 TMEM143Q96AN5 459 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 TUFT1Q9NNX1 390 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 A0A0C4DFX4 3053 aa17.09■□□□□ 0.33
TSPAN9-203ENST00000431374 MYH9P35579 1960 aaKnown RBP17.08■□□□□ 0.33
TSPAN9-203ENST00000431374 C9IYK1 514 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 GTPBP6O43824 516 aaPredicted RBP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 GAS2O43903 313 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 MED24O75448 989 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 FAM189BP81408 668 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 PTGDRQ13258 359 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 EPC2Q52LR7 807 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 LARP1BQ659C4 914 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 SLC24A5Q71RS6 500 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 FIBCD1Q8N539 461 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 PRPF31Q8WWY3 499 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 PSPC1Q8WXF1 523 aaKnown RBP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 NLRP4Q96MN2 994 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 XPNPEP1Q9NQW7 623 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 TRANK1O15050 2925 aa17.08■□□□□ 0.32
TSPAN9-203ENST00000431374 CSDE1O75534 798 aaKnown RBP17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 XRCC6P12956 609 aaKnown RBP eCLIP17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 FGFR4P22455 802 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 RARRES1P49788 294 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 BTG3Q14201 252 aaPredicted RBP17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 RILPL1Q5EBL4 403 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 TMEM192Q8IY95 271 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 CMTR2Q8IYT2 770 aaKnown RBP17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 FBXO22Q8NEZ5 403 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 PIGOQ8TEQ8 1089 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 TCP11Q8WWU5 503 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 PPM1EQ8WY54 764 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 MTRQ99707 1265 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 LRFN2Q9ULH4 789 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 PCDHB7Q9Y5E2 793 aa17.07■□□□□ 0.32
TSPAN9-203ENST00000431374 A0A087WWV3 80 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 DGAT1O75907 488 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 SFPQP23246 707 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 RPA1P27694 616 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 GATMP50440 423 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 LAMTOR4Q0VGL1 99 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 CCDC85BQ15834 202 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 MICALL1Q8N3F8 863 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 CCDC43Q96MW1 224 aaKnown RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 INO80BQ9C086 356 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 ATP6V0A4Q9HBG4 840 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 IFT122Q9HBG6 1241 aa17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 MRPL42Q9Y6G3 142 aaKnown RBP17.06■□□□□ 0.32
TSPAN9-203ENST00000431374 MYO9BQ13459 2157 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 TTC3P53804 2025 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 LAD1O00515 517 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 CTNNB1P35222 781 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 PRPHP41219 470 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 IL17AQ16552 155 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 NACC1Q96RE7 527 aa17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
TSPAN9-203ENST00000431374 TMEM161AQ9NX61 479 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms