RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CETN1Q12798 172 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 TTMPQ5BVD1 217 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 ALS2CLQ60I27 953 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 CDC42EP5Q6NZY7 148 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 NSMFQ6X4W1 530 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 PPP4R3CPQ6ZMV5 832 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 B4GALNT4Q76KP1 1039 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 MIGA2Q7L4E1 593 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 EFCAB13Q8IY85 973 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 SLFN12Q8IYM2 578 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 OGFOD1Q8N543 542 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 ARFGAP2Q8N6H7 521 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 AENQ8WTP8 325 aaKnown RBP8.75□□□□□ -1.01
HPS4-205ENST00000429411 ANKS1AQ92625 1134 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 RIOX1Q9H6W3 641 aa8.75□□□□□ -1.01
HPS4-205ENST00000429411 WNK3Q9BYP7 1800 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 A0A087WUV0 522 aaPredicted RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 SSU72P8A0A1W2PR75 194 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 GRID2IPA4D2P6 1211 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 K7ENM7 598 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 AKAP3O75969 853 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 GCFC2P16383 781 aaKnown RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 FECHP22830 423 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 NAB2Q15742 525 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 CCDC105Q8IYK2 499 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 RNF10Q8N5U6 811 aaKnown RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 DYDC2Q96IM9 177 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 CSRNP1Q96S65 589 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 MLXIPLQ9NP71 852 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 KCNK9Q9NPC2 374 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 DNAJC12Q9UKB3 198 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 CICQ96RK0 1608 aaPredicted RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 MYO1FO00160 1098 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 MYCLP12524 364 aaPredicted RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 KRT5P13647 590 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 CRKP46108 304 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 MAGOHP61326 146 aaKnown RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 SNX1Q13596 522 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 COG2Q14746 738 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 DRAP1Q14919 205 aaPredicted RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 PPP1R7Q15435 360 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 FIGNQ5HY92 759 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 MAGOHBQ96A72 148 aaKnown RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 DNAJC19Q96DA6 116 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 ABT1Q9ULW3 272 aaKnown RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 MYH3P11055 1940 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 CHD4Q14839 1912 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 GALCP54803 685 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 TRIP13Q15645 432 aaPredicted RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 OTUD6AQ7L8S5 288 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 METTL13Q8N6R0 699 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 GLG1Q92896 1179 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 CEP63Q96MT8 703 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 RUSC1Q9BVN2 902 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 UBE2TQ9NPD8 197 aaPredicted RBP8.74□□□□□ -1.01
HPS4-205ENST00000429411 TOGARAM1Q9Y4F4 1720 aa8.74□□□□□ -1.01
HPS4-205ENST00000429411 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 LSP1P33241 339 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 GCLMP48507 274 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 CORO7P57737 925 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 HDLBPQ00341 1268 aaKnown RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 CCDC38Q502W7 563 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 CAPN12Q6ZSI9 719 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 STXBP4Q6ZWJ1 553 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 CCDC50Q8IVM0 306 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 TRIM59Q8IWR1 403 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 ANKRD42Q8N9B4 389 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 USP38Q8NB14 1042 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 BICD1Q96G01 975 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 EIF2AK1Q9BQI3 630 aaKnown RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 TAF1DQ9H5J8 278 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 DDTLA6NHG4 134 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 EVI5O60447 810 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 HARSP12081 509 aaKnown RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 BMP3P12645 472 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 STYK1Q6J9G0 422 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 MDM1Q8TC05 714 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 ITGB4P16144 1822 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 DLATP10515 647 aaKnown RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 PON1P27169 355 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 PSMC2P35998 433 aaKnown RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 AARSP49588 968 aaKnown RBP eCLIP8.73□□□□□ -1.01
HPS4-205ENST00000429411 MYL7Q01449 175 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 CXCL9Q07325 125 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 E2F5Q15329 346 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 SYDE2Q5VT97 1194 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 HGSNATQ68CP4 663 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 CIAPIN1Q6FI81 312 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 RUFY4Q6ZNE9 571 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 PNMA8AQ86V59 439 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 TAB3Q8N5C8 712 aaPredicted RBP8.73□□□□□ -1.01
HPS4-205ENST00000429411 ATP6V1G3Q96LB4 118 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 TSPAN18Q96SJ8 248 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 SPOCK3Q9BQ16 436 aa8.73□□□□□ -1.01
HPS4-205ENST00000429411 CREB3O43889 395 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms