RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 SIX5Q8N196 739 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 SRBD1Q8N5C6 995 aaKnown RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 NCOA7Q8NI08 942 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 KCNG4Q8TDN1 519 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 SLC22A17Q8WUG5 538 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 AUTS2Q8WXX7 1259 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 ACSF2Q96CM8 615 aaPredicted RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 LZTS2Q9BRK4 669 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 MTCL1Q9Y4B5 1905 aaKnown RBP11.73□□□□□ -0.53
RDH11-202ENST00000428130 IRAK3Q9Y616 596 aa11.73□□□□□ -0.53
RDH11-202ENST00000428130 NT5C1B-RDH14C9J2C7 533 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 KRT37O76014 449 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 ATP4AP20648 1035 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 BCAR1P56945 870 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 TMC5Q6UXY8 1006 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 CCDC149Q6ZUS6 474 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 OTOP3Q7RTS5 596 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 GPR149Q86SP6 731 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
RDH11-202ENST00000428130 SMC5Q8IY18 1101 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 MB21D2Q8IYB1 491 aaPredicted RBP11.72□□□□□ -0.53
RDH11-202ENST00000428130 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
RDH11-202ENST00000428130 HELQQ8TDG4 1101 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 TMEM169Q96HH4 297 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 KCNK12Q9HB15 430 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 LY9Q9HBG7 655 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 DLL3Q9NYJ7 618 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 FBXL21Q9UKT6 434 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 R4GN57 208 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 TPRP12270 2363 aaKnown RBP11.72□□□□□ -0.53
RDH11-202ENST00000428130 CACNA1IQ9P0X4 2223 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
RDH11-202ENST00000428130 MYH15Q9Y2K3 1946 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 hCG_1642624A0A1W2PR95 340 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
RDH11-202ENST00000428130 BACH1O14867 736 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 NARSO43776 548 aaKnown RBP11.71□□□□□ -0.53
RDH11-202ENST00000428130 CTSAP10619 480 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.53
RDH11-202ENST00000428130 PTH1RQ03431 593 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 BMS1Q14692 1282 aaKnown RBP11.71□□□□□ -0.53
RDH11-202ENST00000428130 CEP55Q53EZ4 464 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
RDH11-202ENST00000428130 CHD1LQ86WJ1 897 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 RNF169Q8NCN4 708 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 CNTNAP3BQ96NU0 1288 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
RDH11-202ENST00000428130 CNTNAP3Q9BZ76 1288 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 SFXN1Q9H9B4 322 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 ZNF302Q9NR11 478 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 ACACBO00763 2458 aa11.71□□□□□ -0.53
RDH11-202ENST00000428130 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 KRBA1A5PL33 1030 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 MEIS1O00470 390 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 ALDH7A1P49419 539 aaKnown RBP11.7□□□□□ -0.54
RDH11-202ENST00000428130 GNAQP50148 359 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 POLGP54098 1239 aaPredicted RBP11.7□□□□□ -0.54
RDH11-202ENST00000428130 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
RDH11-202ENST00000428130 GIT2Q14161 759 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 DDX53Q86TM3 631 aaKnown RBP11.7□□□□□ -0.54
RDH11-202ENST00000428130 CABP7Q86V35 215 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 METTL13Q8N6R0 699 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
RDH11-202ENST00000428130 RIN2Q8WYP3 895 aaPredicted RBP11.7□□□□□ -0.54
RDH11-202ENST00000428130 PGBD1Q96JS3 809 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 ADAMTS10Q9H324 1103 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 IGSF9Q9P2J2 1179 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 WNT16Q9UBV4 365 aa11.7□□□□□ -0.54
RDH11-202ENST00000428130 DHX15O43143 795 aaKnown RBP11.69□□□□□ -0.54
RDH11-202ENST00000428130 N4BP1O75113 896 aaKnown RBP11.69□□□□□ -0.54
RDH11-202ENST00000428130 ZC3H11AO75152 810 aaKnown RBP eCLIP11.69□□□□□ -0.54
RDH11-202ENST00000428130 CFHP08603 1231 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 RXRAP19793 462 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 EIF4BP23588 611 aaKnown RBP11.69□□□□□ -0.54
RDH11-202ENST00000428130 CLCN3P51790 818 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 NUCB1Q02818 461 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 LETM2Q2VYF4 491 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 SWSAP1Q6NVH7 229 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 PPFIBP1Q86W92 1011 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 DCLK2Q8N568 766 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 LINC01465Q8N7H1 131 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 TMEM87AQ8NBN3 555 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 BCL7CQ8WUZ0 217 aaPredicted RBP11.69□□□□□ -0.54
RDH11-202ENST00000428130 RUBCNQ92622 972 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 IGSF21Q96ID5 467 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
RDH11-202ENST00000428130 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
RDH11-202ENST00000428130 SPTBN2O15020 2390 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 STK25O00506 426 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 CLCN4P51793 760 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 TBC1D8BQ0IIM8 1120 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
RDH11-202ENST00000428130 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
RDH11-202ENST00000428130 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms