RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 LINC01553A4QN01 128 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TBX3O15119 743 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 MAGEB2O15479 319 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 NEMFO60524 1076 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 PSMC5P62195 406 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TBC1D8BQ0IIM8 1120 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 CALCRLQ16602 461 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 XKR3Q5GH77 459 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 PLA2G4FQ68DD2 849 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 EFCAB12Q6NXP0 572 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TET1Q8NFU7 2136 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 GDPD5Q8WTR4 605 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TMEM40Q8WWA1 233 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 ZNF668Q96K58 619 aaPredicted RBP10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TBC1D32Q96NH3 1257 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 SCLT1Q96NL6 688 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 SUGCTQ9HAC7 445 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 PADI3Q9ULW8 664 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 INSL6Q9Y581 213 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 SQORQ9Y6N5 450 aa10.35□□□□□ -0.75
RFX3-AS1-202ENST00000427722 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 CD2BP2O95400 341 aaKnown RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 BAG4O95429 457 aaKnown RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TMOD1P28289 359 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 MCM7P33993 719 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 QARSP47897 775 aaKnown RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 HTRA4P83105 476 aaPredicted RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 CYP4A11Q02928 519 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 GNL2Q13823 731 aaKnown RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 LAPTM4BQ86VI4 370 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 SLFN12Q8IYM2 578 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 LINC01465Q8N7H1 131 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TOP1MTQ969P6 601 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TGS1Q96RS0 853 aaKnown RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 LXNQ9BS40 222 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 FTHL17Q9BXU8 183 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 TMX1Q9H3N1 280 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 CDHR5Q9HBB8 845 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 ERVK-5Q9HDB9 667 aa10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 WRAP73Q9P2S5 460 aaPredicted RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 NOC2LQ9Y3T9 749 aaKnown RBP10.34□□□□□ -0.75
RFX3-AS1-202ENST00000427722 COL6A3P12111 3177 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ENPP3O14638 875 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 GPR32O75388 356 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 STBD1O95210 358 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 P4HBP07237 508 aaKnown RBP10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 CRYBB1P53674 252 aaPredicted RBP10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 NLRP11P59045 1033 aaKnown RBP10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 SPIRE1Q08AE8 756 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 GRB10Q13322 594 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 DRP2Q13474 957 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ANO5Q75V66 913 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 FAM228AQ86W67 206 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 FBXO18Q8NFZ0 1043 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 TMX3Q96JJ7 454 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 C17orf80Q9BSJ5 609 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 TMEM60Q9H2L4 133 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 FOXP1Q9H334 677 aaPredicted RBP10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 RGL1Q9NZL6 768 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ADGRA3Q8IWK6 1321 aa10.33□□□□□ -0.76
RFX3-AS1-202ENST00000427722 CHD9Q3L8U1 2897 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 DENND3A2RUS2 1198 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 GPR182O15218 404 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 MGEA5O60502 916 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 DKC1O60832 514 aaKnown RBP eCLIP10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 YWHABP31946 246 aaKnown RBP10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 TXKP42681 527 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 GPC3P51654 580 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 NPEPPSP55786 919 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ERVK-21P61565 698 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 CTTNQ14247 550 aaKnown RBP10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 EPHA7Q15375 998 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ZNF174Q15697 407 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 NPAS4Q8IUM7 802 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 NOSTRINQ8IVI9 506 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 NLRP7Q8WX94 980 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 DYDC2Q96IM9 177 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 CEP170P1Q96L14 293 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ADAM2Q99965 735 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ADAMTS10Q9H324 1103 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ZSWIM4Q9H7M6 989 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 TTC12Q9H892 705 aaPredicted RBP10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 CYP26B1Q9NR63 512 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 PCDHA12Q9UN75 941 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 ST3GAL5Q9UNP4 418 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
RFX3-AS1-202ENST00000427722 LPXNO60711 386 aa10.31□□□□□ -0.76
RFX3-AS1-202ENST00000427722 OR52Z1P0C646 297 aa10.31□□□□□ -0.76
RFX3-AS1-202ENST00000427722 EIF4BP23588 611 aaKnown RBP10.31□□□□□ -0.76
RFX3-AS1-202ENST00000427722 CTNNB1P35222 781 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms