RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
PDAP1-202ENST00000426447 CLCN5P51795 746 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 EFCAB12Q6NXP0 572 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 NIPA1Q7RTP0 329 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 ZDHHC14Q8IZN3 488 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 SLC39A11Q8N1S5 342 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 SCLT1Q96NL6 688 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 LRRC2Q9BYS8 371 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 RNF19AQ9NV58 838 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 SPDYE4A6NLX3 237 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 IPO5O00410 1097 aaKnown RBP16.62■□□□□ 0.25
PDAP1-202ENST00000426447 EIF4BP23588 611 aaKnown RBP16.62■□□□□ 0.25
PDAP1-202ENST00000426447 SREBF1P36956 1147 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 ID4P47928 161 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 CLCN3P51790 818 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 AP3B2Q13367 1082 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 PPP1R18Q6NYC8 613 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 ADSSL1Q8N142 457 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 TMEM169Q96HH4 297 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 ZNF577Q9BSK1 485 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 GLT8D2Q9H1C3 349 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 TBC1D22BQ9NU19 505 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 DZANK1Q9NVP4 752 aa16.62■□□□□ 0.25
PDAP1-202ENST00000426447 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
PDAP1-202ENST00000426447 V9GY48 417 aaPredicted RBP16.62■□□□□ 0.25
PDAP1-202ENST00000426447 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.61■□□□□ 0.25
PDAP1-202ENST00000426447 FAM86B1E9PN63 330 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
PDAP1-202ENST00000426447 EOMESO95936 686 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 PSAPP07602 524 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 BCAR1P56945 870 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 CLLU1OSQ5K130 101 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 TYW1BQ6NUM6 668 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 KANK3Q6NY19 840 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 ERMP1Q7Z2K6 904 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 VPS52Q8N1B4 723 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
PDAP1-202ENST00000426447 ZNF668Q96K58 619 aaPredicted RBP16.61■□□□□ 0.25
PDAP1-202ENST00000426447 MRPL9Q9BYD2 267 aaKnown RBP16.61■□□□□ 0.25
PDAP1-202ENST00000426447 CYP26B1Q9NR63 512 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 RBM28Q9NW13 759 aaKnown RBP16.61■□□□□ 0.25
PDAP1-202ENST00000426447 GABBR1Q9UBS5 961 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 USTQ9Y2C2 406 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 SAMM50Q9Y512 469 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 PCDHA10Q9Y5I2 948 aa16.61■□□□□ 0.25
PDAP1-202ENST00000426447 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 JAKMIP3Q5VZ66 844 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 KIAA1841Q6NSI8 718 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 ZNF746Q6NUN9 644 aaPredicted RBP16.6■□□□□ 0.25
PDAP1-202ENST00000426447 CABP7Q86V35 215 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 LRRC71Q8N4P6 559 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 NRBP2Q9NSY0 501 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
PDAP1-202ENST00000426447 hCG_1984214I3L0E3 225 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 SLC27A2O14975 620 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 EPCAMP16422 314 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
PDAP1-202ENST00000426447 GIT2Q14161 759 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 TMC5Q6UXY8 1006 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
PDAP1-202ENST00000426447 ZNF713Q8N859 430 aaPredicted RBP16.59■□□□□ 0.25
PDAP1-202ENST00000426447 NLRP7Q8WX94 980 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 AUTS2Q8WXX7 1259 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 FAM167AQ96KS9 214 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 BARHL2Q9NY43 387 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 FBXL21Q9UKT6 434 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 CNTNAP5Q8WYK1 1306 aa16.59■□□□□ 0.25
PDAP1-202ENST00000426447 CFAP54Q96N23 3096 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 STK25O00506 426 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 ZC3H11AO75152 810 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDAP1-202ENST00000426447 FGFR4P22455 802 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 CLK2P49760 499 aaKnown RBP16.58■□□□□ 0.24
PDAP1-202ENST00000426447 RTN1Q16799 776 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 SGMS1Q86VZ5 419 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 KCNG4Q8TDN1 519 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 PLXNA3P51805 1871 aa16.58■□□□□ 0.24
PDAP1-202ENST00000426447 IGLV3-22A0A075B6J6 115 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 ZBTB43O43298 467 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 PI15O43692 258 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 CYP3A4P08684 503 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 DARSP14868 501 aaKnown RBP16.57■□□□□ 0.24
PDAP1-202ENST00000426447 AOC1P19801 751 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 GPC3P51654 580 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 SETQ01105 290 aaPredicted RBP16.57■□□□□ 0.24
PDAP1-202ENST00000426447 TDGQ13569 410 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 OTOP3Q7RTS5 596 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 ZNF598Q86UK7 904 aaKnown RBP16.57■□□□□ 0.24
PDAP1-202ENST00000426447 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 ZBP1Q9H171 429 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 CACNA1HO95180 2353 aa16.57■□□□□ 0.24
PDAP1-202ENST00000426447 PTPRZ1P23471 2315 aaPredicted RBP16.57■□□□□ 0.24
PDAP1-202ENST00000426447 CARNS1A5YM72 827 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms