RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 PEX3P56589 373 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 DRP2Q13474 957 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 SLC9C1Q4G0N8 1177 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 COBLL1Q53SF7 1204 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 CT47A1Q5JQC4 288 aaPredicted RBP17.43■□□□□ 0.38
SCRN1-205ENST00000425819 CXCL17Q6UXB2 119 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 NELFCDQ8IXH7 590 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 MYOCDQ8IZQ8 938 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 GUF1Q8N442 669 aaKnown RBP17.43■□□□□ 0.38
SCRN1-205ENST00000425819 MED15Q96RN5 788 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 MTG1Q9BT17 334 aaPredicted RBP17.43■□□□□ 0.38
SCRN1-205ENST00000425819 KATNAL1Q9BW62 490 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 SETD4Q9NVD3 440 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 COL1A2P08123 1366 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 CCDC169A6NNP5 214 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 K7ENM7 598 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 HAS3O00219 553 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 MSCO60682 206 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 PRPF6O94906 941 aaKnown RBP17.42■□□□□ 0.38
SCRN1-205ENST00000425819 KLRC1P26715 233 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 PPP1R2P41236 205 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 MYL5Q02045 173 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
SCRN1-205ENST00000425819 KCNA10Q16322 511 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 ZC2HC1CQ53FD0 456 aaPredicted RBP17.42■□□□□ 0.38
SCRN1-205ENST00000425819 CTU1Q7Z7A3 348 aaKnown RBP17.42■□□□□ 0.38
SCRN1-205ENST00000425819 EXOC8Q8IYI6 725 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 METTL13Q8N6R0 699 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 KLHDC9Q8NEP7 349 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 ASAP3Q8TDY4 903 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 DHTKD1Q96HY7 919 aaPredicted RBP17.42■□□□□ 0.38
SCRN1-205ENST00000425819 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCRN1-205ENST00000425819 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 RWDD2AQ9UIY3 292 aa17.42■□□□□ 0.38
SCRN1-205ENST00000425819 IGKV6-21A0A0C4DH24 114 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 TRIM49BA6NDI0 452 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 SLC16A4O15374 487 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 CST5P28325 142 aaPredicted RBP17.41■□□□□ 0.38
SCRN1-205ENST00000425819 ARL2P36404 184 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 NPTX2P47972 431 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 CLCN3P51790 818 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 PMS1P54277 932 aaKnown RBP17.41■□□□□ 0.38
SCRN1-205ENST00000425819 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
SCRN1-205ENST00000425819 NCAPHQ15003 741 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 LHX8Q68G74 356 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 EFCAB12Q6NXP0 572 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 EPM2AIP1Q7L775 607 aaPredicted RBP17.41■□□□□ 0.38
SCRN1-205ENST00000425819 ZNF720Q7Z2F6 126 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 KSR1Q8IVT5 923 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 ENOX1Q8TC92 643 aaKnown RBP17.41■□□□□ 0.38
SCRN1-205ENST00000425819 P2RX5Q93086 422 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 IFT74Q96LB3 600 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 JPH2Q9BR39 696 aaPredicted RBP17.41■□□□□ 0.38
SCRN1-205ENST00000425819 KIFC3Q9BVG8 833 aa17.41■□□□□ 0.38
SCRN1-205ENST00000425819 IKBKBO14920 756 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 MAGEB2O15479 319 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 GAS2O43903 313 aaKnown RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 ASGR1P07306 291 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 GLRA2P23416 452 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 CCNE1P24864 410 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 RTP1P59025 263 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 MARCH8Q5T0T0 291 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 IER5Q5VY09 327 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 CCSAPQ6IQ19 270 aaPredicted RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 RNF180Q86T96 592 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 LMBR1Q8WVP7 490 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 TCP11Q8WWU5 503 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 SEMA6BQ9H3T3 888 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 C17orf75Q9HAS0 396 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 KMT5AQ9NQR1 393 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 RRN3P2A6NIE6 340 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 KIF20AO95235 890 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 MAPTP10636 758 aaKnown RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 MRE11P49959 708 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 SMTNP53814 917 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 NCKAP1LP55160 1127 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 KCNA1Q09470 495 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 MTFR1Q15390 333 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 STXBP4Q6ZWJ1 553 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 PCSK9Q8NBP7 692 aaKnown RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
SCRN1-205ENST00000425819 NFE2L3Q9Y4A8 694 aa17.4■□□□□ 0.38
SCRN1-205ENST00000425819 NRCAMQ92823 1304 aa17.39■□□□□ 0.38
SCRN1-205ENST00000425819 BICDL2A1A5D9 508 aa17.39■□□□□ 0.37
SCRN1-205ENST00000425819 EIF3DO15371 548 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCRN1-205ENST00000425819 GJB1P08034 283 aa17.39■□□□□ 0.37
SCRN1-205ENST00000425819 HOXD13P35453 343 aa17.39■□□□□ 0.37
SCRN1-205ENST00000425819 DNM2P50570 870 aa17.39■□□□□ 0.37
SCRN1-205ENST00000425819 HIC1Q14526 733 aa17.39■□□□□ 0.37
SCRN1-205ENST00000425819 TPD52L1Q16890 204 aaPredicted RBP17.39■□□□□ 0.37
SCRN1-205ENST00000425819 SPATA1Q5VX52 437 aa17.39■□□□□ 0.37
SCRN1-205ENST00000425819 ANKRD40Q6AI12 368 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms