RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 TTC3P53804 2025 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 DENND3A2RUS2 1198 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 C5orf67F2Z3F1 127 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 ST18O60284 1047 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 DKC1O60832 514 aaKnown RBP eCLIP20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 LYPLA2O95372 231 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 STAG3L1P0CL83 205 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 YWHABP31946 246 aaKnown RBP20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 BTG3Q14201 252 aaPredicted RBP20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 FAM102BQ5T8I3 360 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 KSR1Q8IVT5 923 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 TPH2Q8IWU9 490 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 C4orf32Q8N8J7 132 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 C1orf112Q9NSG2 853 aa20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 MRPL42Q9Y6G3 142 aaKnown RBP20.53■□□□□ 0.88
SMARCAL1-205ENST00000425815 MYH9P35579 1960 aaKnown RBP20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 A0A087WZ62 844 aa20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 U2AF2P26368 475 aaKnown RBP eCLIP20.52■□□□□ 0.883e-6■■■□□ 17.1
SMARCAL1-205ENST00000425815 GPM6BQ13491 265 aa20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 NOSTRINQ8IVI9 506 aa20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 CMTR2Q8IYT2 770 aaKnown RBP20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 ATXN2LQ8WWM7 1075 aaKnown RBP20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 NLRP7Q8WX94 980 aa20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 FDXACB1Q9BRP7 624 aaPredicted RBP20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 UPF2Q9HAU5 1272 aaKnown RBP20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 PCDHB7Q9Y5E2 793 aa20.52■□□□□ 0.88
SMARCAL1-205ENST00000425815 EVPLQ92817 2033 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 A0A087WWV3 80 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 RB1P06400 928 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 SPATA31C1P0DKV0 1188 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 IBSPP21815 317 aaPredicted RBP20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 DNM2P50570 870 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 TOB1P50616 345 aaPredicted RBP20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 CDC42EP1Q00587 391 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 NBR1Q14596 966 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 PAN2Q504Q3 1202 aaKnown RBP20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 RHPN2Q8IUC4 686 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 TMEM143Q96AN5 459 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 GCOM2Q9BZD3 368 aaPredicted RBP20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 RNF19AQ9NV58 838 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 THEGQ9P2T0 379 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 PPME1Q9Y570 386 aa20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 PRRC2BQ5JSZ5 2229 aaKnown RBP20.51■□□□□ 0.87
SMARCAL1-205ENST00000425815 POTEMA6NI47 508 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 CTNNB1P35222 781 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 TFF2Q03403 129 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 OTUD6AQ7L8S5 288 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 MRPL38Q96DV4 380 aaKnown RBP20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 ASB2Q96Q27 587 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 JPH2Q9BR39 696 aaPredicted RBP20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 ELAC1Q9H777 363 aaKnown RBP20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 IFT122Q9HBG6 1241 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 LRFN2Q9ULH4 789 aa20.5■□□□□ 0.87
SMARCAL1-205ENST00000425815 WDR81Q562E7 1941 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 GRM6O15303 877 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 FGFR1P11362 822 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 RFC5P40937 340 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 TECP42680 631 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 XKR9Q5GH70 373 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 TTC38Q5R3I4 469 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 ZNF410Q86VK4 478 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 PRPF31Q8WWY3 499 aaKnown RBP20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 SLC7A3Q8WY07 619 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 BMP2KQ9NSY1 1161 aaPredicted RBP20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 TMEM161AQ9NX61 479 aa20.49■□□□□ 0.87
SMARCAL1-205ENST00000425815 MED24O75448 989 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 POLGP54098 1239 aaPredicted RBP20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 MRPS5P82675 430 aaKnown RBP20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 ORC2Q13416 577 aaPredicted RBP20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 CAMK1Q14012 370 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 TJAP1Q5JTD0 557 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 CATSPER3Q86XQ3 398 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 ECHDC2Q86YB7 292 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 NEK9Q8TD19 979 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 SCLT1Q96NL6 688 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 BACH2Q9BYV9 841 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 HCSTQ9UBK5 93 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 RWDD3Q9Y3V2 267 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 COL4A3BPQ9Y5P4 624 aa20.48■□□□□ 0.87
SMARCAL1-205ENST00000425815 A0A0U1RQF3 1178 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 TBKBP1A7MCY6 615 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 OR52Z1P0C646 297 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 ZSCAN20P17040 1043 aaPredicted RBP20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 GJB2P29033 226 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 MCM2P49736 904 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 LAMTOR4Q0VGL1 99 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 EMC2Q15006 297 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 ZNF598Q86UK7 904 aaKnown RBP20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 EXOC8Q8IYI6 725 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 PIGOQ8TEQ8 1089 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 NLRP4Q96MN2 994 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 CASD1Q96PB1 797 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 PLVAPQ9BX97 442 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 MINDY3Q9H8M7 445 aa20.47■□□□□ 0.87
SMARCAL1-205ENST00000425815 ATP6V0A4Q9HBG4 840 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 295.6 ms