RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 RWDD3Q9Y3V2 267 aa20.65■□□□□ 0.9
MSH5-207ENST00000425703 MTCH2Q9Y6C9 303 aa20.65■□□□□ 0.9
MSH5-207ENST00000425703 RFXAPO00287 272 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.89
MSH5-207ENST00000425703 GJB2P29033 226 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 POLGP54098 1239 aaPredicted RBP20.64■□□□□ 0.89
MSH5-207ENST00000425703 DSC3Q14574 896 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.64■□□□□ 0.89
MSH5-207ENST00000425703 FIBCD1Q8N539 461 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 NLRP7Q8WX94 980 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 SCLT1Q96NL6 688 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 C17orf80Q9BSJ5 609 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 GCOM2Q9BZD3 368 aaPredicted RBP20.64■□□□□ 0.89
MSH5-207ENST00000425703 INO80BQ9C086 356 aaPredicted RBP20.64■□□□□ 0.89
MSH5-207ENST00000425703 ANKEF1Q9NU02 776 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.89
MSH5-207ENST00000425703 EYSQ5T1H1 3165 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 C9IYK1 514 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 MGEA5O60502 916 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 FAM189BP81408 668 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 EPC2Q52LR7 807 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 XKR9Q5GH70 373 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 CMTR2Q8IYT2 770 aaKnown RBP20.63■□□□□ 0.89
MSH5-207ENST00000425703 ZNF579Q8NAF0 562 aaKnown RBP20.63■□□□□ 0.89
MSH5-207ENST00000425703 FBXO22Q8NEZ5 403 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 TCP11Q8WWU5 503 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 CLP1Q92989 425 aaKnown RBP20.63■□□□□ 0.89
MSH5-207ENST00000425703 ELAC1Q9H777 363 aaKnown RBP20.63■□□□□ 0.89
MSH5-207ENST00000425703 TUFT1Q9NNX1 390 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 MTUS1Q9ULD2 1270 aa20.63■□□□□ 0.89
MSH5-207ENST00000425703 POTEMA6NI47 508 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 LAD1O00515 517 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 ZSCAN20P17040 1043 aaPredicted RBP20.62■□□□□ 0.89
MSH5-207ENST00000425703 TOB1P50616 345 aaPredicted RBP20.62■□□□□ 0.89
MSH5-207ENST00000425703 BTG3Q14201 252 aaPredicted RBP20.62■□□□□ 0.89
MSH5-207ENST00000425703 RHPN2Q8IUC4 686 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 TMEM192Q8IY95 271 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 C4orf32Q8N8J7 132 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 ERMNQ8TAM6 284 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 POLR3CQ9BUI4 534 aaPredicted RBP20.62■□□□□ 0.89
MSH5-207ENST00000425703 CHST12Q9NRB3 414 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 LRFN2Q9ULH4 789 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 PCDHB7Q9Y5E2 793 aa20.62■□□□□ 0.89
MSH5-207ENST00000425703 C5orf67F2Z3F1 127 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 H3BQV1 296 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 ASAP2O43150 1006 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 DGAT1O75907 488 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 RB1P06400 928 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 LINC00271P0C7V0 271 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 SPATA31C1P0DKV0 1188 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 MUTP22033 750 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 SFPQP23246 707 aaKnown RBP eCLIP20.61■□□□□ 0.89
MSH5-207ENST00000425703 TECP42680 631 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 FXR2P51116 673 aaKnown RBP eCLIP20.61■□□□□ 0.89
MSH5-207ENST00000425703 CUL4AQ13619 759 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 EMC2Q15006 297 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 RILPL1Q5EBL4 403 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 GDPD5Q8WTR4 605 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 PSPC1Q8WXF1 523 aaKnown RBP20.61■□□□□ 0.89
MSH5-207ENST00000425703 TMEM161AQ9NX61 479 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 COL4A3BPQ9Y5P4 624 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
MSH5-207ENST00000425703 A0A087WZ62 844 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 H3BNC9 293 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 ZBTB39O15060 712 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 RPA1P27694 616 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 BMPR1AP36894 532 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 PDIA5Q14554 519 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 CATSPER3Q86XQ3 398 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 PRPF31Q8WWY3 499 aaKnown RBP20.6■□□□□ 0.89
MSH5-207ENST00000425703 FDXACB1Q9BRP7 624 aaPredicted RBP20.6■□□□□ 0.89
MSH5-207ENST00000425703 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 DACT1Q9NYF0 836 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 STK24Q9Y6E0 443 aa20.6■□□□□ 0.89
MSH5-207ENST00000425703 PRPHP41219 470 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 RARRES1P49788 294 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 PTGDRQ13258 359 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 MXD4Q14582 209 aaPredicted RBP20.59■□□□□ 0.89
MSH5-207ENST00000425703 LARP1BQ659C4 914 aaKnown RBP20.59■□□□□ 0.89
MSH5-207ENST00000425703 HAUS3Q68CZ6 603 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 PPM1EQ8WY54 764 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 ZNF668Q96K58 619 aaPredicted RBP20.59■□□□□ 0.89
MSH5-207ENST00000425703 NACC1Q96RE7 527 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 MTRQ99707 1265 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 TRAIPQ9BWF2 469 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 RAB34Q9BZG1 259 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 ATP6V0A4Q9HBG4 840 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 IFT122Q9HBG6 1241 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 DBR1Q9UK59 544 aaKnown RBP20.59■□□□□ 0.89
MSH5-207ENST00000425703 PCDHB6Q9Y5E3 794 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 A0A0C4DFX4 3053 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 PRUNE2Q8WUY3 3088 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 LOXHD1Q8IVV2 1947 aa20.59■□□□□ 0.89
MSH5-207ENST00000425703 PRRC2BQ5JSZ5 2229 aaKnown RBP20.58■□□□□ 0.89
MSH5-207ENST00000425703 HOXA2O43364 376 aa20.58■□□□□ 0.89
MSH5-207ENST00000425703 LAMTOR4Q0VGL1 99 aa20.58■□□□□ 0.89
MSH5-207ENST00000425703 NBR1Q14596 966 aa20.58■□□□□ 0.89
MSH5-207ENST00000425703 PCBP1Q15365 356 aaKnown RBP eCLIP20.58■□□□□ 0.89
MSH5-207ENST00000425703 CCDC85BQ15834 202 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms