RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ERAP1Q9NZ08 941 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 EPS15L1Q9UBC2 864 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 DPP7Q9UHL4 492 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 TNNQ9UQP3 1299 aa7.31□□□□□ -1.24
SDCBP-203ENST00000424270 MRPS17Q9Y2R5 130 aaKnown RBP7.31□□□□□ -1.24
SDCBP-203ENST00000424270 RRN3P2A6NIE6 340 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 AXIN1O15169 862 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 MGEA5O60502 916 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 N4BP1O75113 896 aaKnown RBP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 PFKPQ01813 784 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 MTAPQ13126 283 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 GPATCH4Q5T3I0 446 aaKnown RBP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 KIAA1211LQ6NV74 962 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 TPRG1Q6ZUI0 275 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 SLC39A11Q8N1S5 342 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 SLC22A17Q8WUG5 538 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 OSBP2Q969R2 916 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 PPP1R16BQ96T49 567 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 NELL2Q99435 816 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 OSBPL6Q9BZF3 934 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 BCAS3Q9H6U6 928 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 WDR6Q9NNW5 1121 aaKnown RBP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 MAN1C1Q9NR34 630 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 FAM217BQ9NTX9 383 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 RTEL1Q9NZ71 1219 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 CIZ1Q9ULV3 898 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 NDRG2Q9UN36 371 aaKnown RBP7.3□□□□□ -1.24
SDCBP-203ENST00000424270 PCDHB8Q9UN66 801 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 KIAA1217Q5T5P2 1943 aa7.3□□□□□ -1.24
SDCBP-203ENST00000424270 FANCMQ8IYD8 2048 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 FLNBO75369 2602 aaKnown RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 TRIM6-TRIM34B2RNG4 842 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 M0R2C6 588 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 C2CD2LO14523 706 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 INPPL1O15357 1258 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 RNF113AO15541 343 aaKnown RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 FIBPO43427 364 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 LAMP2P13473 410 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 ZSCAN20P17040 1043 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 LIMK1P53667 647 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 BCAR1P56945 870 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 RNASELQ05823 741 aaKnown RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 C19orf57Q0VDD7 668 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 HTR4Q13639 388 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 QRICH1Q2TAL8 776 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 RNF43Q68DV7 783 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 HEATR6Q6AI08 1181 aaKnown RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 ZNF852Q6ZMS4 543 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 LRRC55Q6ZSA7 311 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 VSIG10LQ86VR7 867 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 IL31RAQ8NI17 732 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 CASD1Q96PB1 797 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 SCNM1Q9BWG6 230 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 MRPL9Q9BYD2 267 aaKnown RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 ZBP1Q9H171 429 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 ARRDC1-AS1Q9H2J1 176 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 SMARCAD1Q9H4L7 1026 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 AZI2Q9H6S1 392 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 PRMT8Q9NR22 394 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 PKD2L1Q9P0L9 805 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 ST3GAL5Q9UNP4 418 aa7.29□□□□□ -1.24
SDCBP-203ENST00000424270 NOC2LQ9Y3T9 749 aaKnown RBP7.29□□□□□ -1.24
SDCBP-203ENST00000424270 MBLAC1A4D2B0 266 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 C9IYK1 514 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 GCOM1H8Y6P7 765 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 ANP32CO43423 234 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 ZFYP08048 801 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 POLR2MP0CAP2 368 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 CTSAP10619 480 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 INSRRP14616 1297 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 TARSP26639 723 aaKnown RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 CCR3P51677 355 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 CLCN4P51793 760 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 POLGP54098 1239 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 AK2P54819 239 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 ADCY1Q08828 1119 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 SRSF5Q13243 272 aaKnown RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 CEP85Q6P2H3 762 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 MTSS1LQ765P7 747 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 ADGRF4Q8IZF3 695 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 NME8Q8N427 588 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 FAM160A2Q8N612 972 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 GIMAP8Q8ND71 665 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 HELQQ8TDG4 1101 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 NELL1Q92832 810 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 LSM14BQ9BX40 385 aaKnown RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 AMNQ9BXJ7 453 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
SDCBP-203ENST00000424270 ELAC1Q9H777 363 aaKnown RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 MRPL17Q9NRX2 175 aaKnown RBP7.28□□□□□ -1.24
SDCBP-203ENST00000424270 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 SPATA31C2B4DYI2 1134 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 GIPC1O14908 333 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 TOP3BO95985 862 aaKnown RBP7.27□□□□□ -1.25
SDCBP-203ENST00000424270 GLUD1P00367 558 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 ADH1AP07327 375 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 SPATA31D3P0C874 917 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms