RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 PPP1R16BQ96T49 567 aa21.53■■□□□ 1.04
GCDH-202ENST00000421816 IFIH1Q9BYX4 1025 aaKnown RBP21.53■■□□□ 1.04
GCDH-202ENST00000421816 MTIF3Q9H2K0 278 aaKnown RBP21.53■■□□□ 1.04
GCDH-202ENST00000421816 BHMT2Q9H2M3 363 aa21.53■■□□□ 1.04
GCDH-202ENST00000421816 BMP2KQ9NSY1 1161 aaPredicted RBP21.53■■□□□ 1.04
GCDH-202ENST00000421816 MICAL3Q7RTP6 2002 aa21.53■■□□□ 1.04
GCDH-202ENST00000421816 ABHD14A-ACY1A0A1B0GW23 586 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 USO1O60763 962 aaKnown RBP21.52■■□□□ 1.04
GCDH-202ENST00000421816 NUCB2P80303 420 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 PADI6Q6TGC4 694 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 USP49Q70CQ1 688 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 PRPF31Q8WWY3 499 aaKnown RBP21.52■■□□□ 1.04
GCDH-202ENST00000421816 PSPC1Q8WXF1 523 aaKnown RBP21.52■■□□□ 1.04
GCDH-202ENST00000421816 EPSTI1Q96J88 318 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 OSMRQ99650 979 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 GINS2Q9Y248 185 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 ATP6V1DQ9Y5K8 247 aa21.52■■□□□ 1.04
GCDH-202ENST00000421816 PTPRSQ13332 1948 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 TRIOBPQ9H2D6 2365 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 CYP11B2P19099 503 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 CD52P31358 61 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 ARL2P36404 184 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 IKBKEQ14164 716 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 ZRSR1Q15695 479 aaKnown RBP21.51■■□□□ 1.03
GCDH-202ENST00000421816 SPECC1Q5M775 1068 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 ZNF410Q86VK4 478 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 RHPN2Q8IUC4 686 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 MCPH1Q8NEM0 835 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 KCNG4Q8TDN1 519 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 CALML4Q96GE6 196 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 CDK5RAP3Q96JB5 506 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 RCOR1Q9UKL0 485 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 PADI3Q9ULW8 664 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 NOC2LQ9Y3T9 749 aaKnown RBP21.51■■□□□ 1.03
GCDH-202ENST00000421816 COL4A3BPQ9Y5P4 624 aa21.51■■□□□ 1.03
GCDH-202ENST00000421816 ASAP2O43150 1006 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 EFCAB14O75071 495 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 EIF4BP23588 611 aaKnown RBP21.5■■□□□ 1.03
GCDH-202ENST00000421816 LAMTOR4Q0VGL1 99 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 KARSQ15046 597 aaKnown RBP21.5■■□□□ 1.03
GCDH-202ENST00000421816 FAM43BQ6ZT52 329 aaPredicted RBP21.5■■□□□ 1.03
GCDH-202ENST00000421816 KSR1Q8IVT5 923 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 LRRC15Q8TF66 581 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 NLRP7Q8WX94 980 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 SYMPKQ92797 1274 aaKnown RBP21.5■■□□□ 1.03
GCDH-202ENST00000421816 ZNF668Q96K58 619 aaPredicted RBP21.5■■□□□ 1.03
GCDH-202ENST00000421816 PLIN2Q99541 437 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 ERVK-5Q9HDB9 667 aa21.5■■□□□ 1.03
GCDH-202ENST00000421816 TCHHQ07283 1943 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 A0A087WZ62 844 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 ZBBXA8MT70 800 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 CUTAO60888 179 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 RPS6KA5O75582 802 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 DARSP14868 501 aaKnown RBP21.49■■□□□ 1.03
GCDH-202ENST00000421816 WDR5P61964 334 aaKnown RBP21.49■■□□□ 1.03
GCDH-202ENST00000421816 PAK2Q13177 524 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 MXD4Q14582 209 aaPredicted RBP21.49■■□□□ 1.03
GCDH-202ENST00000421816 FAM228AQ86W67 206 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 CHAMP1Q96JM3 812 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 FDXACB1Q9BRP7 624 aaPredicted RBP21.49■■□□□ 1.03
GCDH-202ENST00000421816 SLC4A7Q9Y6M7 1214 aa21.49■■□□□ 1.03
GCDH-202ENST00000421816 PLCG1P19174 1290 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 KRT85P78386 507 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 ODR4Q5SWX8 454 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 AXDND1Q5T1B0 1012 aaPredicted RBP21.48■■□□□ 1.03
GCDH-202ENST00000421816 SYT2Q8N9I0 419 aaPredicted RBP21.48■■□□□ 1.03
GCDH-202ENST00000421816 ASAP3Q8TDY4 903 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 NLRP4Q96MN2 994 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 GCOM2Q9BZD3 368 aaPredicted RBP21.48■■□□□ 1.03
GCDH-202ENST00000421816 POLR3FQ9H1D9 316 aaPredicted RBP21.48■■□□□ 1.03
GCDH-202ENST00000421816 IFT122Q9HBG6 1241 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 GPRC5CQ9NQ84 441 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 BLOC1S4Q9NUP1 217 aa21.48■■□□□ 1.03
GCDH-202ENST00000421816 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.47■■□□□ 1.03
GCDH-202ENST00000421816 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.47■■□□□ 1.03
GCDH-202ENST00000421816 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.47■■□□□ 1.03
GCDH-202ENST00000421816 GPR182O15218 404 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 PLA2G4BP0C869 781 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 GLRA2P23416 452 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 SLC12A3P55017 1021 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 POU5F1BQ06416 359 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 FAM109BQ6ICB4 259 aaPredicted RBP21.47■■□□□ 1.03
GCDH-202ENST00000421816 RINT1Q6NUQ1 792 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 C1orf186Q6ZWK4 172 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 PHOSPHO2Q8TCD6 241 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 SCLT1Q96NL6 688 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 SLC9A7Q96T83 725 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 FTHL17Q9BXU8 183 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 TMX1Q9H3N1 280 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 CCDC39Q9UFE4 941 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 CIZ1Q9ULV3 898 aaPredicted RBP21.47■■□□□ 1.03
GCDH-202ENST00000421816 PCDHA7Q9UN72 937 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 ST3GAL5Q9UNP4 418 aa21.47■■□□□ 1.03
GCDH-202ENST00000421816 GBF1Q92538 1859 aa21.46■■□□□ 1.03
GCDH-202ENST00000421816 SOX1O00570 391 aaPredicted RBP21.46■■□□□ 1.03
GCDH-202ENST00000421816 SRGAP2CP0DJJ0 459 aa21.46■■□□□ 1.03
GCDH-202ENST00000421816 TXLNAP40222 546 aa21.46■■□□□ 1.03
GCDH-202ENST00000421816 KCNJ6P48051 423 aa21.46■■□□□ 1.03
GCDH-202ENST00000421816 DEFB103AP81534 67 aa21.46■■□□□ 1.03
GCDH-202ENST00000421816 SMAD3P84022 425 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms