RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GJA8P48165 433 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 NCKAP1LP55160 1127 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 TPM4P67936 248 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 GTF2BQ00403 316 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 POU5F1BQ06416 359 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 EMC2Q15006 297 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 MTFR1Q15390 333 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 ZCWPW2Q504Y3 356 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 TTI2Q6NXR4 508 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 SFR1Q86XK3 245 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 ZC3H3Q8IXZ2 948 aaKnown RBP15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 MYCT1Q8N699 235 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 RNF214Q8ND24 703 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 NOC3LQ8WTT2 800 aaKnown RBP15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 TCP11Q8WWU5 503 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 P2RX5Q93086 422 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 KATNAL1Q9BW62 490 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 SLC39A2Q9NP94 309 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 CGNQ9P2M7 1197 aaKnown RBP15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 TRAF3IP3Q9Y228 551 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 PHLPP2Q6ZVD8 1323 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 WDR81Q562E7 1941 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 DOCK5Q9H7D0 1870 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 RRN3P2A6NIE6 340 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 SORBS3O60504 671 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 USO1O60763 962 aaKnown RBP15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 RARBP10826 455 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 PRKAR2AP13861 404 aaKnown RBP15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 HOXC8P31273 242 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 MYBPC2Q14324 1141 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 PPP2R5AQ15172 486 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 EDRF1Q3B7T1 1238 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 MTERF2Q49AM1 385 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 CDKAL1Q5VV42 579 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 IER5Q5VY09 327 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 FAM178BQ8IXR5 827 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 SMYD4Q8IYR2 804 aaPredicted RBP15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 ZNF710Q8N1W2 664 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 LINC01465Q8N7H1 131 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 KLHDC9Q8NEP7 349 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 NELFBQ8WX92 580 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 KCTD10Q9H3F6 313 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 RNPEPQ9H4A4 650 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 MRPL44Q9H9J2 332 aaKnown RBP15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 SPC25Q9HBM1 224 aa15.74■□□□□ 0.11
SHMT1P1-201ENST00000419974 PDXKO00764 312 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 ASAP2O43150 1006 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 ZEB2O60315 1214 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 PRKCSHP14314 528 aaPredicted RBP15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 SMTNP53814 917 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 TBC1D8BQ0IIM8 1120 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 MXD4Q14582 209 aaPredicted RBP15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 KNOP1Q1ED39 458 aaKnown RBP15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 CCSAPQ6IQ19 270 aaPredicted RBP15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 TRIM50Q86XT4 487 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 KAT2BQ92831 832 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 NFKBIZQ9BYH8 718 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 RNF208Q9H0X6 261 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 SEMA6BQ9H3T3 888 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 THAP9Q9H5L6 903 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 NFE2L3Q9Y4A8 694 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 SYNRGQ9UMZ2 1314 aa15.73■□□□□ 0.11
SHMT1P1-201ENST00000419974 C22orf31O95567 290 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 FGFR1OPO95684 399 aaKnown RBP15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 NAMPTP43490 491 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 NPTX2P47972 431 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 ADAM17P78536 824 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 PURAQ00577 322 aaKnown RBP15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 CDC42EP1Q00587 391 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 RAD51AP2Q09MP3 1159 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 DMP1Q13316 513 aaPredicted RBP15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 C12orf56Q8IXR9 622 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 RETREG2Q8NC44 543 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 TMEM161BQ8NDZ6 487 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 GOLGA5Q8TBA6 731 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 HPS3Q969F9 1004 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 TMEM206Q9H813 350 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 ARHGAP28Q9P2N2 729 aa15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 MYH9P35579 1960 aaKnown RBP15.72■□□□□ 0.11
SHMT1P1-201ENST00000419974 MBLAC1A4D2B0 266 aaPredicted RBP15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 SGPL1O95470 568 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 MYCP01106 439 aaPredicted RBP15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 INHAP05111 366 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 INSRRP14616 1297 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 ELNP15502 786 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 PTGS1P23219 599 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 HOXD13P35453 343 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 CASP5P51878 434 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 MCCD1P59942 119 aaPredicted RBP15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 SPAG1Q07617 926 aa15.71■□□□□ 0.11
SHMT1P1-201ENST00000419974 FAM102BQ5T8I3 360 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms