RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZNF668Q96K58 619 aaPredicted RBP16.27■□□□□ 0.2
PAF1-202ENST00000416728 CWH43Q9H720 699 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 ZSWIM6Q9HCJ5 1215 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 MUTYHQ9UIF7 546 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 CYP46A1Q9Y6A2 500 aa16.27■□□□□ 0.2
PAF1-202ENST00000416728 PER2O15055 1255 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 EPB41L2O43491 1005 aaKnown RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 DEXIO95424 95 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 GPC3P51654 580 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 ERVFC1P60507 584 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 Q4G0T1 1027 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 MIER3Q7Z3K6 550 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 RNF135Q8IUD6 432 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 LRRC43Q8N309 656 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 RNF169Q8NCN4 708 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 NLRP7Q8WX94 980 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 CDCA3Q99618 268 aaPredicted RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 PUF60Q9UHX1 559 aaKnown RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 KIAA1671Q9BY89 1806 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 LOXHD1Q8IVV2 1947 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 PSMD10O75832 226 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 TDP2O95551 362 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 DARSP14868 501 aaKnown RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 PLCB3Q01970 1234 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 HERC4Q5GLZ8 1057 aaPredicted RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 ECHDC2Q86YB7 292 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 MRPS27Q92552 414 aaKnown RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 ZNF558Q96NG5 402 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 CASD1Q96PB1 797 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
PAF1-202ENST00000416728 SEPT9Q9UHD8 586 aaPredicted RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
PAF1-202ENST00000416728 CYP3A7-CYP3A51PA0A087WV96 503 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 FSCN2O14926 492 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 SRGAP2BP0DMP2 458 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 CYP3A7P24462 503 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 PPM1AP35813 382 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 TARBP2Q15633 366 aaKnown RBP16.25■□□□□ 0.19
PAF1-202ENST00000416728 DUSP6Q16828 381 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 MTERF2Q49AM1 385 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 XKR3Q5GH77 459 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 PLPP4Q5VZY2 271 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 KCNT2Q6UVM3 1135 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 DAGLBQ8NCG7 672 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 ZNF274Q96GC6 653 aaPredicted RBP16.25■□□□□ 0.19
PAF1-202ENST00000416728 TCF25Q9BQ70 676 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 ENTPD7Q9NQZ7 604 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 DACT1Q9NYF0 836 aa16.25■□□□□ 0.19
PAF1-202ENST00000416728 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 FGFR4P22455 802 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 PBX3P40426 434 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 DNM2P50570 870 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 RBM10P98175 930 aaKnown RBP16.24■□□□□ 0.19
PAF1-202ENST00000416728 CDC42EP1Q00587 391 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 KRT17Q04695 432 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 STK3Q13188 491 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 DRP2Q13474 957 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 GALNT17Q6IS24 598 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 MOXD1Q6UVY6 613 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 LRRC55Q6ZSA7 311 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 FAM177A1Q8N128 213 aaPredicted RBP16.24■□□□□ 0.19
PAF1-202ENST00000416728 VN1R2Q8NFZ6 395 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 EVPLQ92817 2033 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
PAF1-202ENST00000416728 NIFKQ9BYG3 293 aaKnown RBP16.24■□□□□ 0.19
PAF1-202ENST00000416728 GCOM2Q9BZD3 368 aaPredicted RBP16.24■□□□□ 0.19
PAF1-202ENST00000416728 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
PAF1-202ENST00000416728 NGRNQ9NPE2 291 aaKnown RBP16.24■□□□□ 0.19
PAF1-202ENST00000416728 MYH9P35579 1960 aaKnown RBP16.23■□□□□ 0.19
PAF1-202ENST00000416728 M0R2N6 131 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 EOMESO95936 686 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 NONOQ15233 471 aaKnown RBP eCLIP16.23■□□□□ 0.19
PAF1-202ENST00000416728 CLLU1OSQ5K130 101 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 B3GNT9Q6UX72 402 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 HFE2Q6ZVN8 426 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 ETNPPLQ8TBG4 499 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 MBOAT7Q96N66 472 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 PHF7Q9BWX1 381 aaPredicted RBP16.23■□□□□ 0.19
PAF1-202ENST00000416728 SPG21Q9NZD8 308 aa16.23■□□□□ 0.19
PAF1-202ENST00000416728 DDX25Q9UHL0 483 aaKnown RBP16.23■□□□□ 0.19
PAF1-202ENST00000416728 FNDC1Q4ZHG4 1894 aaPredicted RBP16.22■□□□□ 0.19
PAF1-202ENST00000416728 TMEM150BA6NC51 233 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 LOC730098B7Z3J9 87 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 CSDE1O75534 798 aaKnown RBP16.22■□□□□ 0.19
PAF1-202ENST00000416728 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
PAF1-202ENST00000416728 SFPQP23246 707 aaKnown RBP eCLIP16.22■□□□□ 0.19
PAF1-202ENST00000416728 NPY5RQ15761 445 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 TMC7Q7Z402 723 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 ZNF598Q86UK7 904 aaKnown RBP16.22■□□□□ 0.19
PAF1-202ENST00000416728 HELQQ8TDG4 1101 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 EDAQ92838 391 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 RPGRIP1Q96KN7 1286 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 SH2D3AQ9BRG2 576 aa16.22■□□□□ 0.19
PAF1-202ENST00000416728 MRPL9Q9BYD2 267 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms