RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 DNM2P50570 870 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 USP11P51784 963 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 CCT2P78371 535 aaKnown RBP12.8□□□□□ -0.36
SNX30-202ENST00000416585 PKN1Q16512 942 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 HERC4Q5GLZ8 1057 aaPredicted RBP12.8□□□□□ -0.36
SNX30-202ENST00000416585 MIER3Q7Z3K6 550 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 MRPS27Q92552 414 aaKnown RBP12.8□□□□□ -0.36
SNX30-202ENST00000416585 TCF25Q9BQ70 676 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 MRPL9Q9BYD2 267 aaKnown RBP12.8□□□□□ -0.36
SNX30-202ENST00000416585 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
SNX30-202ENST00000416585 USP15Q9Y4E8 981 aaPredicted RBP12.8□□□□□ -0.36
SNX30-202ENST00000416585 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 MSH4O15457 936 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 CDC42EP1Q00587 391 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 DUSP6Q16828 381 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 MTERF2Q49AM1 385 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 ZBTB33Q86T24 672 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 SUGP1Q8IWZ8 645 aaKnown RBP12.79□□□□□ -0.36
SNX30-202ENST00000416585 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 KCNB2Q92953 911 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 PHF7Q9BWX1 381 aaPredicted RBP12.79□□□□□ -0.36
SNX30-202ENST00000416585 GCOM2Q9BZD3 368 aaPredicted RBP12.79□□□□□ -0.36
SNX30-202ENST00000416585 CWH43Q9H720 699 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 CLEC1BQ9P126 229 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 PCDHGC5Q9Y5F6 944 aa12.79□□□□□ -0.36
SNX30-202ENST00000416585 CARNS1A5YM72 827 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 DEXIO95424 95 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 GLP2RO95838 553 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNX30-202ENST00000416585 TECP42680 631 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 GPC3P51654 580 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 ERVFC1P60507 584 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 FAM189BP81408 668 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 DSC3Q14574 896 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 TMC7Q7Z402 723 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 EDAQ92838 391 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 ZNF668Q96K58 619 aaPredicted RBP12.78□□□□□ -0.36
SNX30-202ENST00000416585 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 JPH2Q9BR39 696 aaPredicted RBP12.78□□□□□ -0.36
SNX30-202ENST00000416585 INO80BQ9C086 356 aaPredicted RBP12.78□□□□□ -0.36
SNX30-202ENST00000416585 UNC45AQ9H3U1 944 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
SNX30-202ENST00000416585 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
SNX30-202ENST00000416585 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 PCDHA4Q9UN74 947 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
SNX30-202ENST00000416585 TECTAO75443 2155 aa12.77□□□□□ -0.36
SNX30-202ENST00000416585 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.36
SNX30-202ENST00000416585 ADAMTS3O15072 1205 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 MARCH6O60337 910 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 DKC1O60832 514 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNX30-202ENST00000416585 EOMESO95936 686 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 SKIP12755 728 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 DARSP14868 501 aaKnown RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 ATF7P17544 494 aaPredicted RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 XBP1P17861 261 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 SMC1AQ14683 1233 aaKnown RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 NTRK3Q16288 839 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 XKR3Q5GH77 459 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 CES5AQ6NT32 575 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 LLGL2Q6P1M3 1020 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 HFE2Q6ZVN8 426 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 ALYREFQ86V81 257 aaKnown RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 BLIDQ8IZY5 108 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 RSPH1Q8WYR4 309 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 CASP10Q92851 521 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 SLC5A5Q92911 643 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 LENG9Q96B70 501 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 TMEM169Q96HH4 297 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 SLKQ9H2G2 1235 aaPredicted RBP12.77□□□□□ -0.37
SNX30-202ENST00000416585 HCSTQ9UBK5 93 aa12.77□□□□□ -0.37
SNX30-202ENST00000416585 DENND4AQ7Z401 1863 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 C2orf16Q68DN1 1984 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 MUC6Q6W4X9 2439 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 TMEM221A6NGB7 291 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 M0R296 226 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 FSCN2O14926 492 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 ZNF862O60290 1169 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 CDKL5O76039 1030 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 CBX2Q14781 532 aaPredicted RBP12.76□□□□□ -0.37
SNX30-202ENST00000416585 NONOQ15233 471 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNX30-202ENST00000416585 UGCGQ16739 394 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 Q4G0T1 1027 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 TPRNQ4KMQ1 711 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 GALNT17Q6IS24 598 aa12.76□□□□□ -0.37
SNX30-202ENST00000416585 ANKRD54Q6NXT1 300 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms