RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 TTC28Q96AY4 2481 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 TBKBP1A7MCY6 615 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 JAK2O60674 1132 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 MMP1P03956 469 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 FOSBP53539 338 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 DSC3Q14574 896 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 EP400NLQ6ZTU2 488 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 JPH2Q9BR39 696 aaPredicted RBP28.02■■■□□ 2.08
HLA-C-204ENST00000415537 GCOM2Q9BZD3 368 aaPredicted RBP28.02■■■□□ 2.08
HLA-C-204ENST00000415537 ELAC1Q9H777 363 aaKnown RBP28.02■■■□□ 2.08
HLA-C-204ENST00000415537 ALG13Q9NP73 1137 aaKnown RBP28.02■■■□□ 2.08
HLA-C-204ENST00000415537 PLAGL2Q9UPG8 496 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 ATG2AQ2TAZ0 1938 aa28.02■■■□□ 2.08
HLA-C-204ENST00000415537 FAM205CA6NFA0 338 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 DARSP14868 501 aaKnown RBP28.01■■■□□ 2.07
HLA-C-204ENST00000415537 DRP2Q13474 957 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 FAM102BQ5T8I3 360 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 NCAPH2Q6IBW4 605 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 ANO5Q75V66 913 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 TNFRSF25Q93038 417 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 CEP89Q96ST8 783 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 AAASQ9NRG9 546 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 LIMCH1Q9UPQ0 1083 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 BRWD1Q9NSI6 2320 aa28.01■■■□□ 2.07
HLA-C-204ENST00000415537 IGKV6-21A0A0C4DH24 114 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 BTBD18B2RXH4 712 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 MAFO75444 373 aaPredicted RBP28■■■□□ 2.07
HLA-C-204ENST00000415537 CSPG5O95196 566 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 FAM189BP81408 668 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 EPHA7Q15375 998 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 LEXMQ3ZCV2 418 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 PLA2G4FQ68DD2 849 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 DIS3L2Q8IYB7 885 aaKnown RBP28■■■□□ 2.07
HLA-C-204ENST00000415537 KLHL23Q8NBE8 558 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 PABPC5Q96DU9 382 aaKnown RBP28■■■□□ 2.07
HLA-C-204ENST00000415537 CYP26B1Q9NR63 512 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 SUCLA2Q9P2R7 463 aaPredicted RBP28■■■□□ 2.07
HLA-C-204ENST00000415537 PCDHB12Q9Y5F1 795 aa28■■■□□ 2.07
HLA-C-204ENST00000415537 NCK2O43639 380 aa27.99■■■□□ 2.07
HLA-C-204ENST00000415537 RHPN2Q8IUC4 686 aa27.99■■■□□ 2.07
HLA-C-204ENST00000415537 EXOC8Q8IYI6 725 aa27.99■■■□□ 2.07
HLA-C-204ENST00000415537 CEP170P1Q96L14 293 aa27.99■■■□□ 2.07
HLA-C-204ENST00000415537 INO80BQ9C086 356 aaPredicted RBP27.99■■■□□ 2.07
HLA-C-204ENST00000415537 MYO7AQ13402 2215 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 HOXA2O43364 376 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 ITGB1P05556 798 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 FGFR1P11362 822 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 FGFR4P22455 802 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 SLC7A3Q8WY07 619 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 LXNQ9BS40 222 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 CLDND1Q9NY35 253 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 DACT1Q9NYF0 836 aa27.98■■■□□ 2.07
HLA-C-204ENST00000415537 A0A087WZ62 844 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 SAFBQ15424 915 aaKnown RBP eCLIP27.97■■■□□ 2.07
HLA-C-204ENST00000415537 CALCRLQ16602 461 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 OTUD6AQ7L8S5 288 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 ZNF410Q86VK4 478 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 C4orf19Q8IY42 314 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 ABI1Q8IZP0 508 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 SPPL3Q8TCT6 385 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 PPP2R3CQ969Q6 453 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 FDXACB1Q9BRP7 624 aaPredicted RBP27.97■■■□□ 2.07
HLA-C-204ENST00000415537 PCDHA12Q9UN75 941 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 PPME1Q9Y570 386 aa27.97■■■□□ 2.07
HLA-C-204ENST00000415537 MUC3AQ02505 3323 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 CSDE1O75534 798 aaKnown RBP27.96■■■□□ 2.07
HLA-C-204ENST00000415537 SFPQP23246 707 aaKnown RBP eCLIP27.96■■■□□ 2.07
HLA-C-204ENST00000415537 POLGP54098 1239 aaPredicted RBP27.96■■■□□ 2.07
HLA-C-204ENST00000415537 NPEPPSP55786 919 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 PUS10Q3MIT2 529 aaKnown RBP27.96■■■□□ 2.07
HLA-C-204ENST00000415537 ECHDC2Q86YB7 292 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 CCDC83Q8IWF9 413 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.96■■■□□ 2.07
HLA-C-204ENST00000415537 POF1BQ8WVV4 589 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 DYDC2Q96IM9 177 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 ZSWIM4Q9H7M6 989 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 TYW1Q9NV66 732 aaKnown RBP27.96■■■□□ 2.07
HLA-C-204ENST00000415537 RGL1Q9NZL6 768 aa27.96■■■□□ 2.07
HLA-C-204ENST00000415537 PLXNA4Q9HCM2 1894 aa27.95■■■□□ 2.07
HLA-C-204ENST00000415537 H3BQ06 376 aaPredicted RBP27.95■■■□□ 2.06
HLA-C-204ENST00000415537 YWHABP31946 246 aaKnown RBP27.95■■■□□ 2.06
HLA-C-204ENST00000415537 ST3GAL1Q11201 340 aa27.95■■■□□ 2.06
HLA-C-204ENST00000415537 RNF169Q8NCN4 708 aa27.95■■■□□ 2.06
HLA-C-204ENST00000415537 NEK9Q8TD19 979 aa27.95■■■□□ 2.06
HLA-C-204ENST00000415537 ZSCAN31Q96LW9 406 aaPredicted RBP27.95■■■□□ 2.06
HLA-C-204ENST00000415537 NLRP4Q96MN2 994 aa27.95■■■□□ 2.06
HLA-C-204ENST00000415537 TMEM117Q9H0C3 514 aa27.95■■■□□ 2.06
HLA-C-204ENST00000415537 CHST12Q9NRB3 414 aa27.95■■■□□ 2.06
HLA-C-204ENST00000415537 WRAP73Q9P2S5 460 aaPredicted RBP27.95■■■□□ 2.06
HLA-C-204ENST00000415537 NEMFO60524 1076 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 RFC5P40937 340 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 CYP4A11Q02928 519 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 SPIRE1Q08AE8 756 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 CTTNQ14247 550 aaKnown RBP27.94■■■□□ 2.06
HLA-C-204ENST00000415537 CSPP1Q1MSJ5 1256 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 PTCRAQ6ISU1 281 aaPredicted RBP27.94■■■□□ 2.06
HLA-C-204ENST00000415537 TPH2Q8IWU9 490 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 LLPHQ9BRT6 129 aaKnown RBP27.94■■■□□ 2.06
HLA-C-204ENST00000415537 IGFLR1Q9H665 355 aa27.94■■■□□ 2.06
HLA-C-204ENST00000415537 NCOR1O75376 2440 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms