RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 DUSP9Q99956 384 aaKnown RBP22.09■■□□□ 1.13
AP1S3-205ENST00000415298 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.09■■□□□ 1.13
AP1S3-205ENST00000415298 LNPEPQ9UIQ6 1025 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 PHF20L1A8MW92 1017 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 EPHB4P54760 987 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 SH3BGRP55822 239 aaPredicted RBP22.09■■□□□ 1.13
AP1S3-205ENST00000415298 GSTM4Q03013 218 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 CCDC84Q86UT8 332 aaPredicted RBP22.09■■□□□ 1.13
AP1S3-205ENST00000415298 WDR60Q8WVS4 1066 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 CARD9Q9H257 536 aa22.09■■□□□ 1.13
AP1S3-205ENST00000415298 KRT14P02533 472 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 ABCB5Q2M3G0 1257 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 P3H1Q32P28 736 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 SLC44A4Q53GD3 710 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 ARHGAP18Q8N392 663 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 ZC3H15Q8WU90 426 aaKnown RBP22.08■■□□□ 1.13
AP1S3-205ENST00000415298 INIPQ9NRY2 104 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 TCP11L1Q9NUJ3 509 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 RMND1Q9NWS8 449 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 SLC12A7Q9Y666 1083 aa22.08■■□□□ 1.13
AP1S3-205ENST00000415298 HTR3EA5X5Y0 456 aa22.08■■□□□ 1.12
AP1S3-205ENST00000415298 GOLGA8BA8MQT2 603 aa22.08■■□□□ 1.12
AP1S3-205ENST00000415298 HMGB1P1B2RPK0 211 aaPredicted RBP22.08■■□□□ 1.12
AP1S3-205ENST00000415298 NQO1P15559 274 aaKnown RBP22.08■■□□□ 1.12
AP1S3-205ENST00000415298 CD97P48960 835 aa22.08■■□□□ 1.12
AP1S3-205ENST00000415298 ITGB3BPQ13352 177 aaPredicted RBP22.08■■□□□ 1.12
AP1S3-205ENST00000415298 MTMR4Q9NYA4 1195 aa22.08■■□□□ 1.12
AP1S3-205ENST00000415298 IGKV6D-41A0A0C4DH26 115 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 HNRNPRO43390 633 aaKnown RBP22.07■■□□□ 1.12
AP1S3-205ENST00000415298 MAEAQ7L5Y9 396 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 PTPRN2Q92932 1015 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 ZNF274Q96GC6 653 aaPredicted RBP22.07■■□□□ 1.12
AP1S3-205ENST00000415298 CLMNQ96JQ2 1002 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 CCDC17Q96LX7 622 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 TMEM47Q9BQJ4 181 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 SSC5DA1L4H1 1573 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 SIAH1Q8IUQ4 282 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 MRPS27Q92552 414 aaKnown RBP22.07■■□□□ 1.12
AP1S3-205ENST00000415298 CAVIN3Q969G5 261 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 ATP6V1G3Q96LB4 118 aa22.07■■□□□ 1.12
AP1S3-205ENST00000415298 AKR1B10O60218 316 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 CDC27P30260 824 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 ADD1P35611 737 aaKnown RBP22.06■■□□□ 1.12
AP1S3-205ENST00000415298 DGKHQ86XP1 1220 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 ZNF654Q8IZM8 581 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 DEPTORQ8TB45 409 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 SNX27Q96L92 541 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 TCERG1LQ5VWI1 586 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 CD302Q8IX05 232 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 CMTR1Q8N1G2 835 aaKnown RBP22.06■■□□□ 1.12
AP1S3-205ENST00000415298 UHMK1Q8TAS1 419 aaKnown RBP22.06■■□□□ 1.12
AP1S3-205ENST00000415298 SCOCQ9UIL1 159 aa22.06■■□□□ 1.12
AP1S3-205ENST00000415298 TRAF5O00463 557 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 CAP2P40123 477 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 ALDH5A1P51649 535 aaPredicted RBP22.05■■□□□ 1.12
AP1S3-205ENST00000415298 ARPC4P59998 168 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 RUFY4Q6ZNE9 571 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 TTC30AQ86WT1 665 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 LRRC47Q8N1G4 583 aaKnown RBP22.05■■□□□ 1.12
AP1S3-205ENST00000415298 ZNF148Q9UQR1 794 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 AKR1B15C9JRZ8 316 aaPredicted RBP22.05■■□□□ 1.12
AP1S3-205ENST00000415298 ZBTB43O43298 467 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 LDHAP00338 332 aaKnown RBP22.05■■□□□ 1.12
AP1S3-205ENST00000415298 PDGFRBP09619 1106 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 TROAPQ12815 778 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 FAM217BQ9NTX9 383 aaPredicted RBP22.05■■□□□ 1.12
AP1S3-205ENST00000415298 SUCLA2Q9P2R7 463 aaPredicted RBP22.05■■□□□ 1.12
AP1S3-205ENST00000415298 CTNNAL1Q9UBT7 734 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 CHMP2BQ9UQN3 213 aa22.05■■□□□ 1.12
AP1S3-205ENST00000415298 EEF2P13639 858 aaKnown RBP22.04■■□□□ 1.12
AP1S3-205ENST00000415298 VARSP26640 1264 aaKnown RBP22.04■■□□□ 1.12
AP1S3-205ENST00000415298 MCL1Q07820 350 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 CFAP157Q5JU67 520 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 ANKK1Q8NFD2 765 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 PPP2R3BQ9Y5P8 575 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 PLIN4Q96Q06 1357 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 E7ENQ6 273 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 IRGCQ6NXR0 463 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 MOB2Q70IA6 237 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 PNMA1Q8ND90 353 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 PRCCQ92733 491 aaPredicted RBP22.04■■□□□ 1.12
AP1S3-205ENST00000415298 CDCA5Q96FF9 252 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 SMC6Q96SB8 1091 aa22.04■■□□□ 1.12
AP1S3-205ENST00000415298 ZNF233A6NK53 670 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 JAK2O60674 1132 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 CTDNEP1O95476 244 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ACADSP16219 412 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 NOVP48745 357 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 METAP2P50579 478 aaKnown RBP eCLIP22.03■■□□□ 1.12
AP1S3-205ENST00000415298 PAK2Q13177 524 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 LSAMPQ13449 338 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 IQCEQ6IPM2 695 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 TMEM179Q6ZVK1 233 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 TRIM50Q86XT4 487 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 IQCKQ8N0W5 287 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 CACTIN-AS1Q8N1I8 211 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 CCDC82Q8N4S0 544 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 ANKS1AQ92625 1134 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 HIC2Q96JB3 615 aa22.03■■□□□ 1.12
AP1S3-205ENST00000415298 SH3GL1Q99961 368 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms